RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 TRAPPC2LH3BP13 241 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 OPRD1P41143 372 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 S100A10P60903 97 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 RPP30P78346 268 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 RAB31Q13636 194 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 ENTPD8Q5MY95 495 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 ZNF613Q6PF04 617 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TMEM205Q6UW68 189 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TMEM64Q6YI46 380 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 GRINAQ7Z429 371 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 STEAP2Q8NFT2 490 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TTTY10Q9BZA0 68 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 MKRN2Q9H000 416 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 C1orf198Q9H425 327 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 ANKRD19PQ9H560 264 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 FKRPQ9H9S5 495 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 INTS6Q9UL03 887 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 DDX60LQ5H9U9 1706 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 SCN4AP35499 1836 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 C2orf72A6NCS6 295 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TNFSF14O43557 240 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 SLC16A7O60669 478 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 GPX3P22352 226 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 EIF2S3P41091 472 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 ZNF169Q14929 603 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 PROX2Q3B8N5 592 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 GOT1L1Q8NHS2 421 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 DECR2Q9NUI1 292 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 LAMB2P55268 1798 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TRAV17A0A0B4J275 112 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 HOXC4P09017 264 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 SELEP16581 610 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 MPP2Q14168 576 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 LIPKQ5VXJ0 399 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 NIPAL3Q6P499 406 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 CPEB2Q7Z5Q1 589 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 CPOQ8IVL8 374 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 COQ8AQ8NI60 647 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 MUS81Q96NY9 551 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 FAIMQ9NVQ4 179 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TIMM8AO60220 97 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 PIAS2O75928 621 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 MT-CO3P00414 261 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 S100A9P06702 114 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 NPPBP16860 134 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 RAB3BP20337 219 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 ELAVL4P26378 380 aaKnown RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 HTR5AP47898 357 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 PUDPQ08623 228 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 RAB40BQ12829 278 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 ZNF687Q8N1G0 1237 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 EXD3Q8N9H8 876 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 NETO1Q8TDF5 533 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TREX2Q9BQ50 279 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TXLNGYQ9BZA5 131 aa9.17□□□□□ -0.94
SCAF11-202ENST00000369367 TMED7-TICAM2A0A0A6YYA0 188 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 OR7A10O76100 309 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 IFNA5P01569 189 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 FURINP09958 794 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 CR2P20023 1033 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 CDK2P24941 298 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 TACR3P29371 465 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 TMBIM6P55061 237 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 KEAP1Q14145 624 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 ZNF585AQ6P3V2 769 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 OR1N1Q8NGS0 311 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 OR5H2Q8NGV7 314 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 STT3BQ8TCJ2 826 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 FAM71F1Q96KD3 344 aaPredicted RBP9.16□□□□□ -0.94
SCAF11-202ENST00000369367 CCDC74BQ96LY2 380 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 PDFQ9HBH1 243 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 MOV10Q9HCE1 1003 aaKnown RBP9.16□□□□□ -0.94
SCAF11-202ENST00000369367 SLC17A4Q9Y2C5 497 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 TMED7Q9Y3B3 224 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 NPFFR2Q9Y5X5 522 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 H3BSH0 61 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 HBA1P69905 142 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 HNRNPA0Q13151 305 aaKnown RBP9.16□□□□□ -0.94
SCAF11-202ENST00000369367 AGBL4Q5VU57 503 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 NEURL3Q96EH8 262 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 CNIH4Q9P003 139 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 USP36Q9P275 1121 aaKnown RBP9.16□□□□□ -0.94
SCAF11-202ENST00000369367 EXTL2Q9UBQ6 330 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 NDRG4Q9ULP0 352 aaKnown RBP9.16□□□□□ -0.94
SCAF11-202ENST00000369367 NKX6-3A6NJ46 265 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 BMP2P12643 396 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 GABREP78334 506 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 ACVR1Q04771 509 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 KIAA1211LQ6NV74 962 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 SBSNQ6UWP8 590 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 ARSKQ6UWY0 536 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 SPERTQ8NA61 448 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 PAPOLGQ9BWT3 736 aaKnown RBP9.16□□□□□ -0.94
SCAF11-202ENST00000369367 OR52D1Q9H346 318 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 FBXL3Q9UKT7 428 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 A0A087WZY1 265 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 C4orf47A7E2U8 309 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 NME4O00746 187 aa9.16□□□□□ -0.94
SCAF11-202ENST00000369367 FBP2O00757 339 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms