RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 AUNIPQ9H7T9 357 aa16.14■□□□□ 0.17
CHTOP-203ENST00000368690 PCDHB16Q9NRJ7 776 aa16.14■□□□□ 0.17
CHTOP-203ENST00000368690 CMC2Q9NRP2 79 aa16.14■□□□□ 0.17
CHTOP-203ENST00000368690 ST6GALNAC2Q9UJ37 374 aa16.14■□□□□ 0.17
CHTOP-203ENST00000368690 RCE1Q9Y256 329 aa16.14■□□□□ 0.17
CHTOP-203ENST00000368690 FAM86C2PA6NEL3 165 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 PRR23D1E9PI22 279 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 PDCD5O14737 125 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 PIP5K1CO60331 668 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 SBK2P0C263 348 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 PRR23D2P0DMB1 279 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 GABRA1P14867 456 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 MAPK3P27361 379 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 MAT2AP31153 395 aaKnown RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 SEC61A1P61619 476 aaKnown RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 PRR5P85299 388 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 FLI1Q01543 452 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 ZNF85Q03923 595 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 ZNF169Q14929 603 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 ARSIQ5FYB1 569 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 FAM46CQ5VWP2 391 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 LRFN4Q6PJG9 635 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 PRSS45Q7RTY3 260 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 MEIOBQ8N635 442 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 OR2L2Q8NH16 312 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 CNOT9Q92600 299 aaKnown RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 DTD2Q96FN9 168 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 LRIG1Q96JA1 1093 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 YIPF4Q9BSR8 244 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 OR10A4Q9H209 315 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 TTYH1Q9H313 450 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 KLHL9Q9P2J3 617 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 TAC3Q9UHF0 121 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 CLEC4AQ9UMR7 237 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 NEDD8-MDP1E9PL57 170 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 ARPC1BO15143 372 aaKnown RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 AQP8O94778 261 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 POU4F2Q12837 409 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 TDHQ8IZJ6 230 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 RNF113BQ8IZP6 322 aaKnown RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 VN1R2Q8NFZ6 395 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 FANK1Q8TC84 345 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 LMAN2LQ9H0V9 348 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 OR52A5Q9H2C5 316 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 SFXN1Q9H9B4 322 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 ADGRL4Q9HBW9 690 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 POLMQ9NP87 494 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-203ENST00000368690 GPR34Q9UPC5 381 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 KCNE3Q9Y6H6 103 aa16.13■□□□□ 0.17
CHTOP-203ENST00000368690 ATG2AQ2TAZ0 1938 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 NOTCH4Q99466 2003 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 CDHR4A6H8M9 788 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 J3QLW9 94 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 MID1O15344 667 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 EMC8O43402 210 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 CLEC3AO75596 197 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 KRT33AO76009 404 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 ZNF19P17023 458 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 ATP5A1P25705 553 aaKnown RBP16.12■□□□□ 0.17
CHTOP-203ENST00000368690 B2MP61769 119 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 EIF2B5Q13144 721 aaKnown RBP16.12■□□□□ 0.17
CHTOP-203ENST00000368690 TMUB2Q71RG4 321 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 PDZD9Q8IXQ8 264 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 PM20D2Q8IYS1 436 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 CMTM4Q8IZR5 234 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 KCT2Q8NC54 265 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 CLRN3Q8NCR9 226 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 THEM6Q8WUY1 208 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 HS6ST2Q96MM7 605 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 OR2AG1Q9H205 316 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 MED20Q9H944 212 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 NOX3Q9HBY0 568 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 CA10Q9NS85 328 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 MED11Q9P086 117 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 ASF1AQ9Y294 204 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 PRELID3BQ9Y3B1 194 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 EYSQ5T1H1 3165 aa16.12■□□□□ 0.17
CHTOP-203ENST00000368690 ZC3H12DA2A288 527 aaKnown RBP16.11■□□□□ 0.17
CHTOP-203ENST00000368690 MPTX1A8MV57 137 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 D6RAR5 112 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 PROS1P07225 676 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 HOXB3P14651 431 aaPredicted RBP16.11■□□□□ 0.17
CHTOP-203ENST00000368690 BMP7P18075 431 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 SLC2A5P22732 501 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 ACVR1BP36896 505 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 CD96P40200 585 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 RAD52P43351 418 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 GK2Q14410 553 aaPredicted RBP16.11■□□□□ 0.17
CHTOP-203ENST00000368690 ZMYND11Q15326 602 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 TMEM35AQ53FP2 167 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 SLC25A25Q6KCM7 469 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 COQ8AQ8NI60 647 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 LGALS14Q8TCE9 139 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 PNPLA2Q96AD5 504 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 CD180Q99467 661 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 HCAR1Q9BXC0 346 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 MS4A7Q9GZW8 240 aaPredicted RBP16.11■□□□□ 0.17
CHTOP-203ENST00000368690 ZNF223Q9UK11 482 aaPredicted RBP16.11■□□□□ 0.17
CHTOP-203ENST00000368690 A0A1B0GW55 424 aa16.11■□□□□ 0.17
CHTOP-203ENST00000368690 ANKRD20A5PA0PJZ0 165 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms