RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 FAM174AQ8TBP5 190 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 SGTBQ96EQ0 304 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 ALG8Q9BVK2 526 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 FBXO8Q9NRD0 319 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 EPHA6Q9UF33 1036 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 E9PQ18 207 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 TFECO14948 347 aaPredicted RBP12.72□□□□□ -0.37
SHC1-202ENST00000368445 CHP2O43745 196 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 SLC6A6P31641 620 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 CBLN3Q6UW01 205 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 RNF113BQ8IZP6 322 aaKnown RBP12.72□□□□□ -0.37
SHC1-202ENST00000368445 SLC25A45Q8N413 288 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 TMEM99Q8N816 258 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 ZNF527Q8NB42 609 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 DNAJB12Q9NXW2 375 aaKnown RBP12.72□□□□□ -0.37
SHC1-202ENST00000368445 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
SHC1-202ENST00000368445 FAM25AB3EWG3 89 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 FAM25CB3EWG5 89 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 FAM25GB3EWG6 89 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 LALBAP00709 142 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 S1PR1P21453 382 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 CRYBB2P43320 205 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 BCAP31P51572 246 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 PYDC2Q56P42 97 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 GARNL3Q5VVW2 1013 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 ZNF613Q6PF04 617 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 MEPCEQ7L2J0 689 aaKnown RBP12.71□□□□□ -0.37
SHC1-202ENST00000368445 OR2I1PQ8NGU4 316 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 NEIL3Q8TAT5 605 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 CHPT1Q8WUD6 406 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 WNT16Q9UBV4 365 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 A0A1W2PQL4 384 aaPredicted RBP12.71□□□□□ -0.37
SHC1-202ENST00000368445 C2orf72A6NCS6 295 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 HRO43593 1189 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 F13BP05160 661 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 GPR3P46089 330 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 PHF19Q5T6S3 580 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 STEAP3Q658P3 488 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 C16orf47Q6ZP98 133 aaPredicted RBP12.71□□□□□ -0.37
SHC1-202ENST00000368445 SNX33Q8WV41 574 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 GMEB2Q9UKD1 530 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 PCDHGB6Q9Y5F9 930 aa12.71□□□□□ -0.37
SHC1-202ENST00000368445 FABP12A6NFH5 140 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 C17orf51A8MQB3 221 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 HIST1H2ABP04908 130 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 HTR1FP30939 366 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 AADACL4Q5VUY2 407 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 NIPAL1Q6NVV3 410 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 RPTNQ6XPR3 784 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 HIST3H2AQ7L7L0 130 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 GID4Q8IVV7 300 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 HPS1Q92902 700 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 HIST1H2ACQ93077 130 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 SRA1Q9HD15 236 aaKnown RBP12.71□□□□□ -0.38
SHC1-202ENST00000368445 NANSQ9NR45 359 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 UBQLN4Q9NRR5 601 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 SIGLEC7Q9Y286 467 aa12.71□□□□□ -0.38
SHC1-202ENST00000368445 A0A0B4J2E0 115 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 A0A1B0GX12 115 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 C11orf98E9PRG8 122 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 NDUFB5O43674 189 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 CDC40O60508 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
SHC1-202ENST00000368445 SULT1C4O75897 302 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 HLA-DPB1P04440 258 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 FABP5Q01469 135 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 FZD5Q13467 585 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 TMEM44Q2T9K0 475 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 PLEKHG7Q6ZR37 379 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 CCDC74AQ96AQ1 378 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 NMNAT3Q96T66 252 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 TEAD3Q99594 435 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 NDUFB11Q9NX14 153 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 UPK1BO75841 260 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 DRD5P21918 477 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 PSMD4P55036 377 aaKnown RBP12.7□□□□□ -0.38
SHC1-202ENST00000368445 PLCXD2Q0VAA5 305 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 TP53I3Q53FA7 332 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 LYSMD4Q5XG99 296 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 SLC2A12Q8TD20 617 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 SLC35A3Q9Y2D2 325 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 LSM2Q9Y333 95 aaKnown RBP12.7□□□□□ -0.38
SHC1-202ENST00000368445 A0A1W2PRG6 482 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 ZNF670-ZNF695F2Z2N8 137 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 UBL4AP11441 157 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 ACAA2P42765 397 aaKnown RBP12.7□□□□□ -0.38
SHC1-202ENST00000368445 ZNF45Q02386 682 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 PRKCDQ05655 676 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 IDNKQ5T6J7 187 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 LANCL3Q6ZV70 420 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 SLC29A4Q7RTT9 530 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 ADAMTS18Q8TE60 1221 aa12.7□□□□□ -0.38
SHC1-202ENST00000368445 ATOH1Q92858 354 aaPredicted RBP12.7□□□□□ -0.38
SHC1-202ENST00000368445 DAZLQ92904 295 aaKnown RBP12.7□□□□□ -0.38
SHC1-202ENST00000368445 GTPBP2Q9BX10 602 aaKnown RBP12.7□□□□□ -0.38
SHC1-202ENST00000368445 MRTO4Q9UKD2 239 aaKnown RBP12.7□□□□□ -0.38
SHC1-202ENST00000368445 WDFY4Q6ZS81 3184 aa12.69□□□□□ -0.38
SHC1-202ENST00000368445 SAGE2PA6NJ88 616 aa12.69□□□□□ -0.38
SHC1-202ENST00000368445 SLC22A31A6NKX4 558 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms