RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 PTBP2Q9UKA9 531 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 AK6Q9Y3D8 172 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 MAD1L1Q9Y6D9 718 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 ARPC3O15145 178 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 TAPBPO15533 448 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 GMFGO60234 142 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 TBL1XO60907 577 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 SPAG6O75602 509 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 LRATO95237 230 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 H2BFMP0C1H6 154 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 RBMY1CP0DJD4 496 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 NCK1P16333 377 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 MGMTP16455 207 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 OTX2P32243 289 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 CASP4P49662 377 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 WNT4P56705 351 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 CSTF1Q05048 431 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 ELAVL3Q14576 367 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 HERPUD1Q15011 391 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 SPATA46Q5T0L3 261 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 GPRC6AQ5T6X5 926 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 ATAD3BQ5T9A4 648 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 TPGS2Q68CL5 300 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 ATL3Q6DD88 541 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 IL34Q6ZMJ4 242 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 FAM220AQ7Z4H9 259 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 TMEM179BQ7Z7N9 219 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 MOB3BQ86TA1 216 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 LCA5Q86VQ0 697 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 VSTM4Q8IW00 320 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF683Q8IZ20 524 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 OR10A7Q8NGE5 316 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 MARC2Q969Z3 335 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF670Q9BS34 389 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 CRACR2AQ9BSW2 395 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 CNPY3Q9BT09 278 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 SRXN1Q9BYN0 137 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 MAGT1Q9H0U3 335 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 PTGES2Q9H7Z7 377 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 RASD1Q9Y272 281 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 THSD7BQ9C0I4 1608 aa2.39□□□□□ -2.03
ECHDC1-201ENST00000368287 IGKV1D-8A0A087WSZ0 117 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 A0A1W2PNV4 684 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 NPIPA7E9PJI5 369 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 CPLX1O14810 134 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF264O43296 627 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SNNO75324 88 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 MTX2O75431 263 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 LYPLA1O75608 230 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SLITRK3O94933 977 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 IGLV1-47P01700 117 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 IGHV3-48P01763 117 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 NPIPA8P0DM63 369 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 PNMTP11086 282 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 GCFC2P16383 781 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 GLRA2P23416 452 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 HOXD10P28358 340 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 FGF9P31371 208 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SPIBQ01892 262 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 MAP2K1Q02750 393 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 CHIT1Q13231 466 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 ORC2Q13416 577 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 CAPRIN1Q14444 709 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 TPD52L1Q16890 204 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 TRIM16LQ309B1 348 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 CFAP157Q5JU67 520 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SYT10Q6XYQ8 523 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SCARA5Q6ZMJ2 495 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 DNM1P46Q6ZS02 220 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 PPP1R42Q7Z4L9 355 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 KRTAP11-1Q8IUC1 163 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 TBC1D21Q8IYX1 336 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SVOPLQ8N434 492 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 DHRSXQ8N5I4 330 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 ARL6IP6Q8N6S5 226 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SYT14Q8NB59 555 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 STEAP2Q8NFT2 490 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 OR52I1Q8NGK6 324 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SLC5A11Q8WWX8 675 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 EMG1Q92979 244 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 NEIL2Q969S2 332 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 FGGYQ96C11 551 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 IMMP1LQ96LU5 166 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 GON7Q9BXV9 100 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 NAT10Q9H0A0 1025 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 OR51J1Q9H342 316 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 VCPKMTQ9H867 229 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 POPDC2Q9HBU9 364 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 UFSP2Q9NUQ7 469 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 SMOXQ9NWM0 555 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 AIPL1Q9NZN9 384 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 PIPOXQ9P0Z9 390 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 NPIPA1Q9UND3 350 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 POLDIP2Q9Y2S7 368 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 PLLPQ9Y342 182 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 TIMM10BQ9Y5J6 103 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 ARHGAP23Q9P227 1491 aa2.38□□□□□ -2.03
ECHDC1-201ENST00000368287 A0A1B0GUS0 222 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 MAGEB3O15480 346 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 CXCL13O43927 109 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms