RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 EIF5AP63241 154 aaKnown RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SLC35F2Q8IXU6 374 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SPTSSAQ969W0 71 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 MS4A6EQ96DS6 147 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 VN1R3Q9BXE9 311 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 KLHL13Q9P2N7 655 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 TVP23AA6NH52 213 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 B4GAT1O43505 415 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 PRKYO43930 277 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 KCNK5O95279 499 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SLC2A5P22732 501 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SSTR4P31391 388 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 RBM34P42696 430 aaKnown RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CHRFAM7AQ494W8 412 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 MFSD12Q6NUT3 480 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 YRDCQ86U90 279 aaKnown RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 CHRDQ9H2X0 955 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 WNT16Q9UBV4 365 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 DAPP1Q9UN19 280 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 STUB1Q9UNE7 303 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 MEGF11A6BM72 1044 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 PLPP1O14494 284 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 LRRTM2O43300 516 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 PDE7AQ13946 482 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 KHDC1LQ5JSQ8 128 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 LANCL3Q6ZV70 420 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 SYT13Q7L8C5 426 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF578Q96N58 590 aaPredicted RBP10.78□□□□□ -0.68
SYNE1-204ENST00000367248 ITGB1BP2Q9UKP3 347 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 PMF1-BGLAPU3KQ54 211 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 MYH7P12883 1935 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 MYH8P13535 1937 aa10.78□□□□□ -0.68
SYNE1-204ENST00000367248 GABRG2P18507 467 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 CAPZBP47756 277 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 CLDN17P56750 224 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 TP53I3Q53FA7 332 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 PGM2L1Q6PCE3 622 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 SPRED2Q7Z698 418 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 MAGED1Q9Y5V3 778 aaPredicted RBP10.77□□□□□ -0.68
SYNE1-204ENST00000367248 ANKRD30BLA7E2S9 258 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 SLC16A7O60669 478 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 RBBP9O75884 186 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 RGS9O75916 674 aaPredicted RBP10.77□□□□□ -0.68
SYNE1-204ENST00000367248 GFERP55789 205 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 SF3A2Q15428 464 aaKnown RBP10.77□□□□□ -0.68
SYNE1-204ENST00000367248 PGGHGQ32M88 737 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 XKR7Q5GH72 579 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 SPERTQ8NA61 448 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF597Q96LX8 424 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 SLC6A7Q99884 636 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 QRSL1Q9H0R6 528 aaKnown RBP10.77□□□□□ -0.68
SYNE1-204ENST00000367248 OR10A4Q9H209 315 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF337Q9Y3M9 751 aa10.77□□□□□ -0.68
SYNE1-204ENST00000367248 ANKRD36CQ5JPF3 1778 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 PCDH17O14917 1159 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 F13BP05160 661 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 HTR4Q13639 388 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 GPR139Q6DWJ6 353 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 HCAR1Q9BXC0 346 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 TRAV27A0A087WT01 109 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 SPTY2D1-AS1A0A0U1RR47 76 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 GYPBP06028 91 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 CDK5R2Q13319 367 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 NEURL3Q96EH8 262 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 KCNIP1Q9NZI2 227 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 SH2B3Q9UQQ2 575 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 SLC6A5Q9Y345 797 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 SYT5O00445 386 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 SYT7O43581 403 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 RFPL3O75679 317 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 UCHL1P09936 223 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 LIM2P55344 173 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 WNT4P56705 351 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 CAMK2DQ13557 499 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF704Q6ZNC4 412 aaPredicted RBP10.77□□□□□ -0.69
SYNE1-204ENST00000367248 MED25Q71SY5 747 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 MAVSQ7Z434 540 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 OR5AK2Q8NH90 309 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 ELP4Q96EB1 424 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 LYRM4Q9HD34 91 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 PHIPQ8WWQ0 1821 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 ZSCAN5BA6NJL1 495 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 TACR3P29371 465 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF45Q02386 682 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM69Q5SWH9 247 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 MISPQ8IVT2 679 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF610Q8N9Z0 462 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 FAM46BQ96A09 425 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 INTS14Q96SY0 518 aa10.77□□□□□ -0.69
SYNE1-204ENST00000367248 PEX11BO96011 259 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 GPX2P18283 190 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 RBMXP38159 391 aaKnown RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 CARD18P57730 90 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 UBE2UQ5VVX9 321 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF584Q8IVC4 421 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 OR7G1Q8NGA0 311 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 DMRTB1Q96MA1 342 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 FUNDC2Q9BWH2 189 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 WSB2Q9NYS7 404 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 AKAP11Q9UKA4 1901 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms