RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 OR2T33Q8NG76 320 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 PELOQ9BRX2 385 aaKnown RBP18.21■□□□□ 0.51
TRIM58-201ENST00000366481 SNRNP200O75643 2136 aaKnown RBP18.21■□□□□ 0.51
TRIM58-201ENST00000366481 FAM74A7A6NL05 159 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 CREBL2O60519 120 aaPredicted RBP18.21■□□□□ 0.51
TRIM58-201ENST00000366481 FCMRO60667 390 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 MT-ND5P03915 603 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 PTHLHP12272 177 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 MC3RP41968 323 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 RGS8P57771 180 aaPredicted RBP18.21■□□□□ 0.51
TRIM58-201ENST00000366481 CSNK1G2P78368 415 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 CDK3Q00526 305 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 FAM74A3Q4VXF1 159 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 NKAIN4Q8IVV8 208 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 ZNF485Q8NCK3 441 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 OR9A2Q8NGT5 310 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 OR8K3Q8NH51 312 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 OR5K2Q8NHB8 316 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 CNRIP1Q96F85 164 aaPredicted RBP18.21■□□□□ 0.51
TRIM58-201ENST00000366481 C4orf36Q96KX1 117 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 CAPN10Q9HC96 672 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 PRELID3BQ9Y3B1 194 aa18.21■□□□□ 0.51
TRIM58-201ENST00000366481 SURF4O15260 269 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 MAGEB4O15481 346 aaPredicted RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 GNRH1P01148 92 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 HTR1FP30939 366 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 B2MP61769 119 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 ID2Q02363 134 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 HLXQ14774 488 aaPredicted RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 AADACL4Q5VUY2 407 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 SETD7Q8WTS6 366 aaKnown RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 PLXNA2O75051 1894 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 LRRK1Q38SD2 2015 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 A0A1W2PR48 441 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 SMAD9O15198 467 aaKnown RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 THBS2P35442 1172 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 BCL6P41182 706 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 ELAVL3Q14576 367 aaKnown RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 MLF2Q15773 248 aaPredicted RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 PGGHGQ32M88 737 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 LRRN1Q6UXK5 716 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 HDDC3Q8N4P3 179 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 BVESQ8NE79 360 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 C17orf47Q8NEP4 570 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 OR52B4Q8NGK2 314 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 SCARB1Q8WTV0 552 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 SUSD6Q92537 303 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 SLC6A17Q9H1V8 727 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 ZNF768Q9H5H4 540 aaKnown RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 GPN1Q9HCN4 374 aaPredicted RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 FANCFQ9NPI8 374 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 SEMA4GQ9NTN9 838 aa18.2■□□□□ 0.5
TRIM58-201ENST00000366481 MRTO4Q9UKD2 239 aaKnown RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 PCDHGA9Q9Y5G4 932 aaKnown RBP18.2■□□□□ 0.5
TRIM58-201ENST00000366481 FLRT2O43155 660 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 ATF1P18846 271 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 HES5Q5TA89 166 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 SLC38A3Q99624 504 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 IFT22Q9H7X7 185 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 PRDM9Q9NQV7 894 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 NTMQ9P121 344 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 MCRIP1C9JLW8 97 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 TRHRP34981 398 aaPredicted RBP18.19■□□□□ 0.5
TRIM58-201ENST00000366481 OR12D2P58182 307 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 ST3GAL3Q11203 375 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 GK2Q14410 553 aaPredicted RBP18.19■□□□□ 0.5
TRIM58-201ENST00000366481 HACD4Q5VWC8 232 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 TMEM88Q6PEY1 159 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 CD300LDQ6UXZ3 194 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 TMUB2Q71RG4 321 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 ZDHHC1Q8WTX9 485 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 GHSRQ92847 366 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 ORAI1Q96D31 301 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 LRIG1Q96JA1 1093 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 EPHX3Q9H6B9 360 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 SPHK1Q9NYA1 384 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 MARK1Q9P0L2 795 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 KLK11Q9UBX7 282 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 UBE2QL1A1L167 161 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 LDOC1O95751 146 aaPredicted RBP18.19■□□□□ 0.5
TRIM58-201ENST00000366481 UGT2B7P16662 529 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 STARP49675 285 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 MMP15P51511 669 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 C6orf132Q5T0Z8 1188 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 GSG1LQ6UXU4 331 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 RD3Q7Z3Z2 195 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 CYB561A3Q8NBI2 242 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 OR51Q1Q8NH59 317 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 LGALS14Q8TCE9 139 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 ACAD8Q9UKU7 415 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 INSL6Q9Y581 213 aa18.19■□□□□ 0.5
TRIM58-201ENST00000366481 WDPCPO95876 746 aa18.18■□□□□ 0.5
TRIM58-201ENST00000366481 GYPBP06028 91 aa18.18■□□□□ 0.5
TRIM58-201ENST00000366481 BMP7P18075 431 aa18.18■□□□□ 0.5
TRIM58-201ENST00000366481 CLDN12P56749 244 aa18.18■□□□□ 0.5
TRIM58-201ENST00000366481 EFNB1P98172 346 aa18.18■□□□□ 0.5
TRIM58-201ENST00000366481 MC2RQ01718 297 aa18.18■□□□□ 0.5
TRIM58-201ENST00000366481 TMEM44Q2T9K0 475 aa18.18■□□□□ 0.5
TRIM58-201ENST00000366481 OVCH2Q7RTZ1 564 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms