RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PCGF3Q3KNV8 242 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 TRMT12Q53H54 448 aaKnown RBP15.2■□□□□ 0.02
SCAF1-201ENST00000360565 PLCZ1Q86YW0 608 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 LACC1Q8IV20 430 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 FAM26EQ8N5C1 309 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 KATNB1Q9BVA0 655 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 ATP13A2Q9NQ11 1180 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 C12orf4Q9NQ89 552 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 YARS2Q9Y2Z4 477 aaKnown RBP15.2■□□□□ 0.02
SCAF1-201ENST00000360565 H0Y8X5 98 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 PIP5K1CO60331 668 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 SNRPBP14678 240 aaKnown RBP15.2■□□□□ 0.02
SCAF1-201ENST00000360565 HTR1FP30939 366 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 PRSS3P35030 304 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 ETV5P41161 510 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 ETV1P50549 477 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 S100A10P60903 97 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 FOXK2Q01167 660 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 SQSTM1Q13501 440 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 ATAD3CQ5T2N8 411 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 OR13C3Q8NGS6 347 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 FOXN4Q96NZ1 517 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 CHST8Q9H2A9 424 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 RBFOX1Q9NWB1 397 aaKnown RBP15.2■□□□□ 0.02
SCAF1-201ENST00000360565 ACOD1A6NK06 481 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 TRIM64CA6NLI5 447 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 CENPBD1B2RD01 187 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 H3BML4 177 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 EIF4EBP2Q13542 120 aaPredicted RBP15.2■□□□□ 0.02
SCAF1-201ENST00000360565 GRK1Q15835 563 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 RNASE10Q5GAN6 216 aaKnown RBP15.2■□□□□ 0.02
SCAF1-201ENST00000360565 TM9SF4Q92544 642 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 YIPF6Q96EC8 236 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 UBQLN4Q9NRR5 601 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 TAS2R8Q9NYW2 309 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 NTNG1Q9Y2I2 539 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 V9GY05 133 aa15.2■□□□□ 0.02
SCAF1-201ENST00000360565 COL11A1P12107 1806 aaPredicted RBP15.2■□□□□ 0.02
SCAF1-201ENST00000360565 MEN1O00255 615 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 PHYHO14832 338 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ZNF217O75362 1048 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 OLFM2O95897 454 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 S100A6P06703 90 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 OR1D4P47884 311 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 EIF5AP63241 154 aaKnown RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 FAM69BQ5VUD6 431 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ZNF767PQ75MW2 155 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 OR5J2Q8NH18 312 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 TRIM43Q96BQ3 446 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 C7orf34Q96L11 122 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ZNF337Q9Y3M9 751 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 PCP4L1A6NKN8 68 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ARPC1BO15143 372 aaKnown RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 IFNA21P01568 189 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 AMY2AP04746 511 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 CHRM4P08173 479 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 RAB12Q6IQ22 244 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 MR1Q95460 341 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ARSGQ96EG1 525 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 WDR77Q9BQA1 342 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 LMF2Q9BU23 707 aaKnown RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 NUBP2Q9Y5Y2 271 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 PAPPA2Q9BXP8 1791 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ZNFX1Q9P2E3 1918 aaKnown RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 GAPDHSO14556 408 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 TP53I11O14683 189 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 OR8G3PP0DMU2 310 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 TBC1D25Q3MII6 688 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 TPRA1Q86W33 373 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 SNAPC3Q92966 411 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 NXPE2Q96DL1 559 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 INTS14Q96SY0 518 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 KIR3DX1Q9H7L2 352 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 VDAC3Q9Y277 283 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 FZD7O75084 574 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 MT-ND4P03905 459 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 RPS5P46782 204 aaKnown RBP15.19■□□□□ 0.02
SCAF1-201ENST00000360565 CEBPGP53567 150 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ZNF417Q8TAU3 575 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 ADAMTS14Q8WXS8 1223 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 MYADMQ96S97 322 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 LMAN1LQ9HAT1 526 aa15.19■□□□□ 0.02
SCAF1-201ENST00000360565 CDHR4A6H8M9 788 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 EGFP01133 1207 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 PTGS2P35354 604 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TSFMP43897 325 aaKnown RBP15.18■□□□□ 0.02
SCAF1-201ENST00000360565 YPEL5P62699 121 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 HYAL4Q2M3T9 481 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TMEM240Q5SV17 173 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 HBMQ6B0K9 141 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 METAP1DQ6UB28 335 aaPredicted RBP15.18■□□□□ 0.02
SCAF1-201ENST00000360565 CNOT9Q92600 299 aaKnown RBP15.18■□□□□ 0.02
SCAF1-201ENST00000360565 DIO2Q92813 273 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TMEM185BQ9H7F4 350 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 PPIL1Q9Y3C6 166 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TRDV1A0A1B0GX56 115 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 F5H0A9 414 aaPredicted RBP15.18■□□□□ 0.02
SCAF1-201ENST00000360565 PIPP12273 146 aaPredicted RBP15.18■□□□□ 0.02
SCAF1-201ENST00000360565 ITGB8P26012 769 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 CLDN12P56749 244 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms