RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR52D1Q9H346 318 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 RAB40BQ12829 278 aa17.21■□□□□ 0.34
SHANK1-202ENST00000359082 SLC9A3R2Q15599 337 aa17.21■□□□□ 0.34
SHANK1-202ENST00000359082 C3orf58Q8NDZ4 430 aa17.21■□□□□ 0.34
SHANK1-202ENST00000359082 KRBA1A5PL33 1030 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 M0QZQ0 153 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SULT1C2O00338 296 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SURF4O15260 269 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 ENSAO43768 121 aaKnown RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 PIP5K1CO60331 668 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 C15orf39Q6ZRI6 1047 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 KIAA0907Q7Z7F0 614 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 DCP2Q8IU60 420 aaKnown RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 BCL7BQ9BQE9 202 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SAMD10Q9BYL1 202 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SLC25A31Q9H0C2 315 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 VAPAQ9P0L0 249 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 TNK1Q13470 666 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 TMEM244Q5VVB8 128 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 HSD17B8Q92506 261 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 PRAF2O60831 178 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 EGFP01133 1207 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 TP53P04637 393 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 GPR18Q14330 331 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 WBP2NLQ6ICG8 309 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF322Q6U7Q0 402 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 PARS2Q7L3T8 475 aaKnown RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SCD5Q86SK9 330 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 FOXRED1Q96CU9 486 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 BTBD2Q9BX70 525 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SDR39U1Q9NRG7 319 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 TUSC2O75896 110 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SEC14L2O76054 403 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 GLSO94925 669 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 HOXA1P49639 335 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-202ENST00000359082 ATP1B3P54709 279 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SLC7A5P1Q8MH63 180 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 SLC29A1Q99808 456 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 AP1G1O43747 822 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 PEA15Q15121 130 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 CST9LP1Q5W188 147 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 CASD1Q96PB1 797 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 ELOVL3Q9HB03 270 aa17.2■□□□□ 0.34
SHANK1-202ENST00000359082 ITGB2P05107 769 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 MAT1AQ00266 395 aaKnown RBP17.19■□□□□ 0.34
SHANK1-202ENST00000359082 DUSP7Q16829 419 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 RANBP10Q6VN20 620 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF845Q96IR2 970 aaPredicted RBP17.19■□□□□ 0.34
SHANK1-202ENST00000359082 KLHL42Q9P2K6 505 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 SLC23A2Q9UGH3 650 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 TMEM269A0A1B0GVZ9 245 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 IGHG1P01857 330 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 ITGAMP11215 1152 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 DMBX1Q8NFW5 382 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 CPNE7Q9UBL6 633 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 GHRLQ9UBU3 117 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 CA5BQ9Y2D0 317 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 LRRC37A3O60309 1634 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 SOCS6O14544 535 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 DOK2O60496 412 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 TMEM11P17152 192 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 SSTP61278 116 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 CXADRP78310 365 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 POU3F1Q03052 451 aaPredicted RBP17.19■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF169Q14929 603 aaPredicted RBP17.19■□□□□ 0.34
SHANK1-202ENST00000359082 FAM83HQ6ZRV2 1179 aaPredicted RBP17.19■□□□□ 0.34
SHANK1-202ENST00000359082 OR4F15Q8NGB8 312 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 LMF2Q9BU23 707 aaKnown RBP17.19■□□□□ 0.34
SHANK1-202ENST00000359082 A0A1W2PS29 197 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 MED6O75586 246 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 F13BP05160 661 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 SLC6A11P48066 632 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 CTSL3PQ5NE16 218 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 TAS1R1Q7RTX1 841 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 DTD2Q96FN9 168 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF578Q96N58 590 aaPredicted RBP17.19■□□□□ 0.34
SHANK1-202ENST00000359082 SDHAF2Q9NX18 166 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 VEZF1Q14119 521 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 OR7E24Q6IFN5 339 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 SPARTQ8N0X7 666 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 MRI1Q9BV20 369 aa17.19■□□□□ 0.34
SHANK1-202ENST00000359082 H3BQ06 376 aaPredicted RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 FGF4P08620 206 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 RNF4P78317 190 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 UBXN10Q96LJ8 280 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 SUCNR1Q9BXA5 334 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 OR2T1O43869 369 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 C1orf105O95561 183 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 SLC10A3P09131 477 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 IL32P24001 234 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 APOOLQ6UXV4 268 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 PSMF1Q92530 271 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 SORT1Q99523 831 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 VN1R3Q9BXE9 311 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 KLF16Q9BXK1 252 aaPredicted RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 HLA-AP01891 365 aaKnown RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 PTGER4P35408 488 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 RELAQ04206 551 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 MKXQ8IYA7 352 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 OR1J4Q8NGS1 313 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms