RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ERVK-25P63136 954 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 PSPHP78330 225 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 ALG11Q2TAA5 492 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 C4orf46Q504U0 113 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 BBS1Q8NFJ9 593 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 THAP3Q8WTV1 239 aaPredicted RBP11.4□□□□□ -0.58
COL20A1-201ENST00000358894 S100A16Q96FQ6 103 aaKnown RBP11.4□□□□□ -0.58
COL20A1-201ENST00000358894 LRRC3BQ96PB8 259 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 TNFRSF13CQ96RJ3 184 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 TSNAXQ99598 290 aaKnown RBP11.4□□□□□ -0.58
COL20A1-201ENST00000358894 SLC9B1P1A6NJY1 282 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 OR5K4A6NMS3 321 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 AKR7A2O43488 359 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 PLGP00747 810 aaPredicted RBP11.4□□□□□ -0.58
COL20A1-201ENST00000358894 PIPP12273 146 aaPredicted RBP11.4□□□□□ -0.58
COL20A1-201ENST00000358894 TGM1P22735 817 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 GXYLT1Q4G148 440 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 ARHGAP40Q5TG30 622 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 BTN2A1Q7KYR7 527 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 ZNF627Q7L945 461 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 PRR22Q8IZ63 422 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 CLDN22Q8N7P3 220 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 FRMD1Q8N878 549 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 HINT3Q9NQE9 182 aaKnown RBP11.4□□□□□ -0.58
COL20A1-201ENST00000358894 MUTYHQ9UIF7 546 aa11.4□□□□□ -0.58
COL20A1-201ENST00000358894 SPAG17Q6Q759 2223 aa11.4□□□□□ -0.59
COL20A1-201ENST00000358894 TSPAN11A1L157 253 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 UBL4AP11441 157 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 CTXN1P60606 82 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PSMA6P60900 246 aaKnown RBP11.39□□□□□ -0.59
COL20A1-201ENST00000358894 MAT1AQ00266 395 aaKnown RBP11.39□□□□□ -0.59
COL20A1-201ENST00000358894 AGBL4Q5VU57 503 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 TMEM64Q6YI46 380 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 OR4C15Q8NGM1 316 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PFN4Q8NHR9 129 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 MSLNLQ96KJ4 702 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 THAP7Q9BT49 309 aaPredicted RBP11.39□□□□□ -0.59
COL20A1-201ENST00000358894 A4GNTQ9UNA3 340 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PCDHGB2Q9Y5G2 931 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 LOC100509620A0A075B734 347 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 SERTM1A2A2V5 107 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 EIF1AYO14602 144 aaKnown RBP11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PPM1BO75688 479 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 GIMD1P0DJR0 217 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PRKAR1BP31321 381 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PITPNBP48739 271 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 RAB12Q6IQ22 244 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 RPTNQ6XPR3 784 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 JAGN1Q8N5M9 183 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 ELMOD3Q96FG2 381 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 NT5DC2Q9H857 520 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PRODH2Q9UF12 536 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 DOCK4Q8N1I0 1966 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 A0A0J9YY10 115 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 H3BQ06 376 aaPredicted RBP11.39□□□□□ -0.59
COL20A1-201ENST00000358894 SOX1O00570 391 aaPredicted RBP11.39□□□□□ -0.59
COL20A1-201ENST00000358894 NPC1O15118 1278 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 GMDSO60547 372 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 RAD1O60671 282 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 MOSPD3O75425 235 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 CEACAM5P06731 702 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 FPR3P25089 353 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 ADPRHP54922 357 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 PCBP3P57721 371 aaKnown RBP11.39□□□□□ -0.59
COL20A1-201ENST00000358894 LAIR2Q6ISS4 152 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 ZCCHC12Q6PEW1 402 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 KRT77Q7Z794 578 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 ZDHHC1Q8WTX9 485 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 RSPRY1Q96DX4 576 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 B3GNT4Q9C0J1 378 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 SLC35A3Q9Y2D2 325 aa11.39□□□□□ -0.59
COL20A1-201ENST00000358894 NRG2O14511 850 aaPredicted RBP11.38□□□□□ -0.59
COL20A1-201ENST00000358894 RNF13O43567 381 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 MAS1P04201 325 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 SPARCP09486 303 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 PPP2CBP62714 309 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 PPP2CAP67775 309 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL20A1-201ENST00000358894 TRAM1Q15629 374 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 TMEM69Q5SWH9 247 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 NXNL2Q5VZ03 156 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 ZNF836Q6ZNA1 936 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 NUP54Q7Z3B4 507 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 TMED4Q7Z7H5 227 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 SMAP2Q8WU79 429 aaPredicted RBP11.38□□□□□ -0.59
COL20A1-201ENST00000358894 SLC7A6Q92536 515 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 SLC25A46Q96AG3 418 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 S100A13Q99584 98 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 SLC6A20Q9NP91 592 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 PRDM9Q9NQV7 894 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 RXFP3Q9NSD7 469 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 NDUFB11Q9NX14 153 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 METTL21EPA6NDL7 271 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 OTOL1A6NHN0 477 aaPredicted RBP11.38□□□□□ -0.59
COL20A1-201ENST00000358894 FFAR1O14842 300 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 DSCR3O14972 297 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 PAPLNO95428 1278 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 PAHP00439 452 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
COL20A1-201ENST00000358894 ACTA2P62736 377 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms