RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ABRACLQ9P1F3 81 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SNX11Q9Y5W9 270 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PEX16Q9Y5Y5 336 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ROBO3Q96MS0 1386 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 DLGAP1O14490 977 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TNFSF11O14788 317 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PRAMEF4O60810 478 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 MT-ND4P03905 459 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PCSK6P29122 969 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 METAP1P53582 386 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SMN1Q16637 294 aaKnown RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 MPP7Q5T2T1 576 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 OR13C2Q8NGS9 318 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 LMO3Q8TAP4 145 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ADAMTS16Q8TE57 1224 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 FGGYQ96C11 551 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 MYEOVQ96EZ4 313 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SCP2D1Q9UJQ7 156 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 MTNR1AP48039 350 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 OPCMLQ14982 345 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF630Q2M218 657 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 DTD2Q96FN9 168 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 NENFQ9UMX5 172 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 HAX1O00165 279 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 KLKB1P03952 638 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 APELAP0DMC3 54 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 CAMLGP49069 296 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TGFBR3Q03167 851 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SELPLGQ14242 412 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 HNRNPA1L2Q32P51 320 aaKnown RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 FAM26DQ5JW98 314 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 GPR149Q86SP6 731 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TPRA1Q86W33 373 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SLC37A2Q8TED4 501 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 NRTNQ99748 197 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ALDOBP05062 364 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 MTHFD2P13995 350 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TACR1P25103 407 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 IDUAP35475 653 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 PPIAP62937 165 aaKnown RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ASTE1Q2TB18 679 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 MRPL2Q5T653 305 aaKnown RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SLITRK4Q8IW52 837 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 MKXQ8IYA7 352 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ACBD7Q8N6N7 88 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 CD200R1Q8TD46 325 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 NANOS1Q8WY41 292 aaKnown RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ZDHHC16Q969W1 377 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ISOC1Q96CN7 298 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 NMNAT3Q96T66 252 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 PBDC1Q9BVG4 233 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 PLA2G2FQ9BZM2 168 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SQORQ9Y6N5 450 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TMEM269A0A1B0GVZ9 245 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 MATN2O00339 956 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 DDAH2O95865 285 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 GSTM3P21266 225 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ENPP1P22413 925 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TNFSF4P23510 183 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TNFRSF8P28908 595 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ACSM3Q53FZ2 586 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 THSD4Q6ZMP0 1018 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 FCRLAQ7L513 359 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 NLRC3Q7RTR2 1065 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SLC7A5P1Q8MH63 180 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 FBXO27Q8NI29 283 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SAV1Q9H4B6 383 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 MYNNQ9NPC7 610 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 GPR173Q9NS66 373 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 OBP2AQ9NY56 170 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 SLC45A1Q9Y2W3 748 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 A0A1W2PQL4 384 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF891A8MT65 544 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ABHD16AO95870 558 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 CCL7P80098 99 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 PLAC9Q5JTB6 97 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 PSMF1Q92530 271 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TLCD1Q96CP7 247 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 CMSS1Q9BQ75 279 aaKnown RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 GINS3Q9BRX5 216 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 VN1R3Q9BXE9 311 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 HRH4Q9H3N8 390 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 LTB4R2Q9NPC1 389 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 NDUFAF4Q9P032 175 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 CBLCQ9ULV8 474 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TEX51A0A1B0GUA7 166 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TRAPPC2LH3BP13 241 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 H3BUI4 141 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 HOXD9P28356 352 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-202ENST00000357409 GNG10P50151 68 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 GK3PQ14409 553 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 HBMQ6B0K9 141 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 IL34Q6ZMJ4 242 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 ZFAND4Q86XD8 727 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 MENTQ9BUN1 341 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 KATNBL1Q9H079 304 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TMEM72A0PK05 275 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 TRIM64CA6NLI5 447 aa6.85□□□□□ -1.31
VPS13A-202ENST00000357409 CLINT1Q14677 625 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms