RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 AKR1C8PQ5T2L2 129 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 PIWIL3Q7Z3Z3 882 aaKnown RBP10.98□□□□□ -0.65
COL9A1-202ENST00000357250 FAM217AQ8IXS0 508 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 KLHDC8BQ8IXV7 354 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 PGBD5Q8N414 524 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF454Q8N9F8 522 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 OR51L1Q8NGJ5 315 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 OR2T27Q8NH04 317 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 ASB12Q8WXK4 309 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 C4orf36Q96KX1 117 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SLC6A20Q9NP91 592 aa10.98□□□□□ -0.65
COL9A1-202ENST00000357250 USP36Q9P275 1121 aaKnown RBP10.98□□□□□ -0.65
COL9A1-202ENST00000357250 MCTS1Q9ULC4 181 aaKnown RBP10.98□□□□□ -0.65
COL9A1-202ENST00000357250 SULT1C2O00338 296 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 GOSR2O14653 212 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CRTAPO75718 401 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 HTR3BO95264 441 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 AIFM1O95831 613 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 IGHEP01854 428 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 TAS2R20P59543 309 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 TGFBR3Q03167 851 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 RAB31Q13636 194 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 LTB4RQ15722 352 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 GPR19Q15760 415 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 LMNTD1Q8N9Z9 388 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 SYNPRQ8TBG9 265 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 KLF15Q9UIH9 416 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 RASD1Q9Y272 281 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 ADAM18Q9Y3Q7 739 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 C7orf72A4D263 438 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CACNG3O60359 315 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 MT-CO2P00403 227 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CAPNS1P04632 268 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF26P17031 533 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 SLC2A5P22732 501 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 MMP12P39900 470 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 ERVK-25P63136 954 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 ACVR1Q04771 509 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 GPR176Q14439 515 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 MBOAT2Q6ZWT7 520 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 KIAA0907Q7Z7F0 614 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CMIPQ8IY22 773 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 OR56B4Q8NH76 319 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 GAB3Q8WWW8 586 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 PSD2Q9BQI7 771 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 SORBS1Q9BX66 1292 aaKnown RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 LMAN1LQ9HAT1 526 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 MRPL15Q9P015 296 aaKnown RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CD300AQ9UGN4 299 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 DIMT1Q9UNQ2 313 aaKnown RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 POLHQ9Y253 713 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 SLC9B1P1A6NJY1 282 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF705EA8MWA4 302 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 FRS3O43559 492 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 B4GALT3O60512 393 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 TSPAN15O95858 294 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 IGHG1P01857 330 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 RPL34P49207 117 aaKnown RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 GPR18Q14330 331 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 TMEM52BQ4KMG9 183 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 NXNL2Q5VZ03 156 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 MRPL21Q7Z2W9 205 aaKnown RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 ZFAND1Q8TCF1 268 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 DOK4Q8TEW6 326 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 TMEM68Q96MH6 324 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 INSM2Q96T92 566 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 MFFQ9GZY8 342 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 SYNPO2LQ9H987 977 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 EMC3Q9P0I2 261 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CA14Q9ULX7 337 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 THSD7AQ9UPZ6 1657 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 A0A1W2PQ09 198 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 SCG5P05408 212 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CR2P20023 1033 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 PTBP1P26599 531 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 C21orf33P30042 268 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 NR0B2Q15466 257 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 PARP16Q8N5Y8 322 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-202ENST00000357250 OR5B2Q96R09 309 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 CCL26Q9Y258 94 aa10.97□□□□□ -0.65
COL9A1-202ENST00000357250 DCDC2BA2VCK2 349 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 TPT1P13693 172 aaKnown RBP10.96□□□□□ -0.65
COL9A1-202ENST00000357250 CD38P28907 300 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 CD6P30203 668 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 UQCRC1P31930 480 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 GJA4P35212 333 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 MTNR1BP49286 362 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 ERVFC1P60507 584 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 SELPLGQ14242 412 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 MPEG1Q2M385 716 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 HBMQ6B0K9 141 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 TSSK4Q6SA08 328 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 RCBTB1Q8NDN9 531 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 FNDC9Q8TBE3 224 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 SLC38A5Q8WUX1 472 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 SORCS2Q96PQ0 1159 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 WDR83Q9BRX9 315 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms