RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZAR1LA6NP61 321 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 GNB5O14775 395 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 EFSO43281 561 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 KLF4O43474 513 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 NUDT14O95848 222 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 PGCP20142 388 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 SLC1A3P43003 542 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 GSSP48637 474 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 NUP107P57740 925 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 TSPAN31Q12999 210 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 PTGES3Q15185 160 aaKnown RBP16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 SLC22A10Q63ZE4 541 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 ISLR2Q6UXK2 745 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 RTL4Q6ZR62 310 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 P3H2Q8IVL5 708 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 CYP4Z2PQ8N1L4 340 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 GALNT16Q8N428 558 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 ZNF563Q8TA94 476 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 HDAC2Q92769 488 aaKnown RBP16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 FAM46AQ96IP4 442 aaKnown RBP16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 SGCZQ96LD1 299 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 HS6ST2Q96MM7 605 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 ANGPTL4Q9BY76 406 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 MEPEQ9NQ76 525 aaPredicted RBP16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 C20orf141Q9NUB4 165 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 CNIH4Q9P003 139 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 MSRB2Q9Y3D2 182 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 CNTRLQ7Z7A1 2325 aa16.51■□□□□ 0.23
SMARCD3-202ENST00000356800 ANKUB1A6NFN9 424 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 TP53P04637 393 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 SMIM18P0DKX4 95 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 FPR3P25089 353 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 RBM34P42696 430 aaKnown RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 SOX8P57073 446 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 CDC20Q12834 499 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 QPRTQ15274 297 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 CTU2Q2VPK5 515 aaKnown RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 SLC30A6Q6NXT4 461 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 WDSUB1Q8N9V3 476 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 KCNE4Q8WWG9 221 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 SDHAF3Q9NRP4 125 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 TEKT2Q9UIF3 430 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 IGKV1D-42A0A075B6H8 117 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 ZNF891A8MT65 544 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 G3V3Y1 287 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 KPNA4O00629 521 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 CDC40O60508 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 F10P00742 488 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 IGFBP1P08833 259 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 TACR3P29371 465 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 GPR4P46093 362 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 RRADP55042 308 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 SUMO3P55854 103 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 IL5RAQ01344 420 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 PRKCDQ05655 676 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 CDK5R2Q13319 367 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 CRTC2Q53ET0 693 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 RBM48Q5RL73 367 aaKnown RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 C6orf141Q5SZD1 244 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 ABHD17BQ5VST6 288 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 Q6ZPB1 254 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 OR2M3Q8NG83 312 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 CCNL2Q96S94 520 aaPredicted RBP16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 NPAS1Q99742 590 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 DSN1Q9H410 356 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 TAS2R10Q9NYW0 307 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 SELENONQ9NZV5 590 aa16.5■□□□□ 0.23
SMARCD3-202ENST00000356800 ANKRD33BA6NCL7 494 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 A6NL46 340 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 CDC42EP2O14613 210 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 GP1BBP13224 206 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 MAKP20794 623 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 ELK4P28324 431 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 CD96P40200 585 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 CYB561P49447 251 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 MAD2L1BPQ15013 274 aaPredicted RBP16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 LAIR2Q6ISS4 152 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 ARSKQ6UWY0 536 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 RASSF6Q6ZTQ3 369 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 GPALPP1Q8IXQ4 340 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 DEPDC4Q8N2C3 294 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 FADS6Q8N9I5 356 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 MRPS26Q9BYN8 205 aaKnown RBP16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 OSGIN1Q9UJX0 560 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 FBXL2Q9UKC9 423 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 POLHQ9Y253 713 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 MED31Q9Y3C7 131 aa16.49■□□□□ 0.23
SMARCD3-202ENST00000356800 A0A0G2JMM0 328 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 A0A1W2PPB8 328 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 A0A1W2PRS3 328 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 ELOA3DA6NLF2 546 aaPredicted RBP16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 KIR3DP1A8MWS1 328 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 KLK10O43240 276 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 SOX14O95416 240 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 PNMTP11086 282 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 IFI30P13284 250 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 MSX1P28360 303 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 CTBP2P56545 445 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 CXCR4P61073 352 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 TOP3AQ13472 1001 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms