RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GLB1L2Q8IW92 636 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 MIB2Q96AX9 1013 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 CMSS1Q9BQ75 279 aaKnown RBP16.2■□□□□ 0.18
COL27A1-201ENST00000356083 MFRPQ9BY79 579 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 DLC1Q96QB1 1528 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 XRCC3O43542 346 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 CXCR4P61073 352 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 ABHD11Q8NFV4 315 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 FUT1P19526 365 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 DRD1P21728 446 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 PTGIRP43119 386 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-201ENST00000356083 CYP4V2Q6ZWL3 525 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-201ENST00000356083 MFSD6LQ8IWD5 586 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 DCLRE1CQ96SD1 692 aaKnown RBP16.2■□□□□ 0.18
COL27A1-201ENST00000356083 NKX3-1Q99801 234 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-201ENST00000356083 EMC9Q9Y3B6 208 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 IQCF3P0C7M6 154 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 TCN2P20062 427 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 G0S2P27469 103 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 EXOSC7Q15024 291 aaKnown RBP16.2■□□□□ 0.18
COL27A1-201ENST00000356083 CTSL3PQ5NE16 218 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 ZNF704Q6ZNC4 412 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-201ENST00000356083 OR5AS1Q8N127 324 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 OR9Q2Q8NGE9 314 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 SGPP1Q9BX95 441 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 HEBP1Q9NRV9 189 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 RNF186Q9NXI6 227 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 PSAT1Q9Y617 370 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 PREX1Q8TCU6 1659 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 BCL9O00512 1426 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 WDR31Q8NA23 367 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 INPP5KQ9BT40 448 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 KIF1AQ12756 1690 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 MED6O75586 246 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 OR8U8P0C7N1 319 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 HRH2P25021 359 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 TRAV27A0A087WT01 109 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 A0A096LPI6 279 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 LRRC30A6NM36 301 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 MCRIP1C9JLW8 97 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 HLA-DOBP13765 273 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 USP51Q70EK9 711 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 HRASLS5Q96KN8 279 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 PRRC1Q96M27 445 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 GPR22Q99680 433 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 SALL4Q9UJQ4 1053 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 ATP23Q9Y6H3 246 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 TP53P04637 393 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-201ENST00000356083 TAF9Q16594 264 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 YIF1BQ5BJH7 314 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 LANCL2Q9NS86 450 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 ZFAND5O76080 213 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 EPGNQ6UW88 154 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 BEST4Q8NFU0 473 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 VN1R3Q9BXE9 311 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 ROBO1Q9Y6N7 1651 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 C4orf47A7E2U8 309 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 HIDE1A8MVS5 230 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 SPINT3P49223 89 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 MLF2Q15773 248 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-201ENST00000356083 TSSK4Q6SA08 328 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 TMEM184AQ6ZMB5 413 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 SYT13Q7L8C5 426 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 NLRC3Q7RTR2 1065 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 ADGRF3Q8IZF5 1079 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 UNGP13051 313 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-201ENST00000356083 CNR2P34972 360 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 GPR17Q13304 367 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 ZNF74Q16587 644 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 SUMF1Q8NBK3 374 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 OR52R1Q8NGF1 315 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 OR5D18Q8NGL1 313 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 COQ10AQ96MF6 247 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 INTS14Q96SY0 518 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 PBX4Q9BYU1 374 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 SLC25A31Q9H0C2 315 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 A0A1W2PPH5 198 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 OR8J2Q8NGG1 315 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 TMEM19Q96HH6 336 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 TEX264Q9Y6I9 313 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 CEP290O15078 2479 aa16.19■□□□□ 0.18
COL27A1-201ENST00000356083 UGT2B7P16662 529 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 ARHGAP11BQ3KRB8 267 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 TMEM176BQ3YBM2 270 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-201ENST00000356083 C6orf136Q5SQH8 315 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 CHDHQ8NE62 594 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-201ENST00000356083 C4orf36Q96KX1 117 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 CLDN17P56750 224 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 UPP1Q16831 310 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 GDPD3Q7L5L3 318 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 ANKRD9Q96BM1 317 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-201ENST00000356083 TXNL4BQ9NX01 149 aaKnown RBP16.18■□□□□ 0.18
COL27A1-201ENST00000356083 A0A0U1RQS6 177 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 MLF1P58340 268 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 FADDQ13158 208 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 SLC22A10Q63ZE4 541 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 ELMOD3Q96FG2 381 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 A6NIZ1 184 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms