RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 RPS21P63220 83 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 TNFRSF17Q02223 184 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SAXO2Q658L1 398 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ESPNLQ6ZVH7 1005 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 USP51Q70EK9 711 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 OR5T1Q8NG75 326 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 OR6F1Q8NGZ6 308 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SLC7A13Q8TCU3 470 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ST7LQ8TDW4 575 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 TCTEX1D2Q8WW35 142 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 C1QTNF6Q9BXI9 259 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SDHAF2Q9NX18 166 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF226Q9NYT6 803 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 MEMO1Q9Y316 297 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 CSO75390 466 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF888P0CJ79 500 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 CD34P28906 385 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 LBX1P52954 281 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 UBE2MP61081 183 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 PRDX1Q06830 199 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 HTR4Q13639 388 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 PAN3Q58A45 887 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SIAH3Q8IW03 269 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 CMIPQ8IY22 773 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 RLN3Q8WXF3 142 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 OR2M4Q96R27 311 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 C12orf57Q99622 126 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SMIM3Q9BZL3 60 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 GLIPR2Q9H4G4 154 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SLC23A1Q9UHI7 598 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 TDRD15B5MCY1 1934 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 FZD7O75084 574 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 IFNA21P01568 189 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 UGT2B7P16662 529 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 NFYAP23511 347 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 HLA-DMAP28067 261 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ERV3-1Q14264 604 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 EXOSC7Q15024 291 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ABCA11PQ4W5N1 156 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 LRRC69Q6ZNQ3 347 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 OR5W2Q8NH69 310 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SEC61A2Q9H9S3 476 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 CNOT2Q9NZN8 540 aaKnown RBP13.12□□□□□ -0.31
SREBF1-202ENST00000355815 AHCTF1Q8WYP5 2266 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 SCN10AQ9Y5Y9 1956 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 A0A0A6YYH2 397 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 A6NJ64 397 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 PRKNO60260 465 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 SDC3O75056 442 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 IFITM3Q01628 133 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 EXOSC2Q13868 293 aaKnown RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 FAM71E1Q6IPT2 247 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 SYT9Q86SS6 491 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 GID4Q8IVV7 300 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 IL17RDQ8NFM7 739 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 OR56A1Q8NGH5 318 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 OR5M3Q8NGP4 307 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 CNTNAP3BQ96NU0 1288 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 PSD2Q9BQI7 771 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 SPHK1Q9NYA1 384 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 KCMF1Q9P0J7 381 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 FBXL21Q9UKT6 434 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 NDRG4Q9ULP0 352 aaKnown RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 UGT2B10P36537 528 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 DLX5P56178 289 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF77Q15935 545 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 EIPR1Q53HC9 387 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 RNASE10Q5GAN6 216 aaKnown RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 LRFN4Q6PJG9 635 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 UNC5DQ6UXZ4 953 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 TECPR1Q7Z6L1 1165 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 PATE1Q8WXA2 126 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 OR2M2Q96R28 347 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 RPH3AQ9Y2J0 694 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 DCDC2BA2VCK2 349 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 EMC8O43402 210 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 PRAMEF2O60811 474 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 PSPHP78330 225 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 CBFBQ13951 182 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 RHEBQ15382 184 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 EIF2S3LQ2VIR3 472 aaKnown RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 NDUFAF7Q7L592 441 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 ASPGQ86U10 573 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 DCUN1D4Q92564 292 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 CDS1Q92903 461 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 ARL11Q969Q4 196 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 MVB12BQ9H7P6 319 aa13.11□□□□□ -0.31
SREBF1-202ENST00000355815 PNO1Q9NRX1 252 aaKnown RBP13.11□□□□□ -0.31
SREBF1-202ENST00000355815 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms