RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TPPPO94811 219 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 LPLP06858 475 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 T-ENOLP0DO92 83 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 BCL2A1Q16548 175 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 EXOSC6Q5RKV6 272 aaKnown RBP12.34□□□□□ -0.43
SCN8A-202ENST00000355133 METTL4Q8N3J2 472 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 SNAPC3Q92966 411 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 FAM53CQ9NYF3 392 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 NENFQ9UMX5 172 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 A0A0U1RQK1 487 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 H7C1C5 153 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 SRPX2O60687 465 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-202ENST00000355133 GALR3O60755 368 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-202ENST00000355133 HPGDSO60760 199 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 CDK1P06493 297 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 ALDOCP09972 364 aaKnown RBP12.34□□□□□ -0.43
SCN8A-202ENST00000355133 GAAP10253 952 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 HLA-DMAP28067 261 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 LCN6P62502 163 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 RAB31Q13636 194 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 GK3PQ14409 553 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 CD163Q86VB7 1156 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF595Q8IYB9 648 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 OR1J4Q8NGS1 313 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 OR14A16Q8NHC5 309 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 DUSP19Q8WTR2 217 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 THAP7Q9BT49 309 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-202ENST00000355133 SYT11Q9BT88 431 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 DHRS4Q9BTZ2 278 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 V9GY05 133 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 DNAJB6O75190 326 aa12.33□□□□□ -0.43
SCN8A-202ENST00000355133 YPEL5P62699 121 aa12.33□□□□□ -0.43
SCN8A-202ENST00000355133 DPY19L2P1Q6NXN4 242 aa12.33□□□□□ -0.43
SCN8A-202ENST00000355133 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.43
SCN8A-202ENST00000355133 GCM1Q9NP62 436 aa12.33□□□□□ -0.43
SCN8A-202ENST00000355133 SLC6A20Q9NP91 592 aa12.33□□□□□ -0.43
SCN8A-202ENST00000355133 PRKRAO75569 313 aaKnown RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TSPAN15O95858 294 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 DLSTP36957 453 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 DCAF7P61962 342 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 RBPJQ06330 500 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 LEXMQ3ZCV2 418 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 FAM111BQ6SJ93 734 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 GAREM2Q75VX8 874 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 SLC16A14Q7RTX9 510 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 MKXQ8IYA7 352 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ACBD4Q8NC06 268 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 POC1BQ8TC44 478 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 GTF2H4Q92759 462 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 CTRCQ99895 268 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 WDR83Q9BRX9 315 aaKnown RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TSPAN10Q9H1Z9 355 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF576Q9H609 170 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 DHCR7Q9UBM7 475 aaKnown RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 B4DXG7 233 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF264O43296 627 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 CX3CR1P49238 355 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 EFNA3P52797 238 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 CLDN17P56750 224 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 CST9Q5W186 159 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 B3GNT8Q7Z7M8 397 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 HYLS1Q96M11 299 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 SPIN2AQ99865 258 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 SPIN2BQ9BPZ2 258 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TESQ9UGI8 421 aaKnown RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 HEMK1Q9Y5R4 338 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 FAM155AB1AL88 458 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TRAPPC2LH3BP13 241 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 IMPA1P29218 277 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 BDKRB2P30411 391 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 HTR5AP47898 357 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ATP1B3P54709 279 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TAS2R31P59538 309 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 PCBD1P61457 104 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 MZT1Q08AG7 82 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 LTB4RQ15722 352 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 LTC4SQ16873 150 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 HAVCR2Q8TDQ0 301 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 RSPRY1Q96DX4 576 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 PDLIM5Q96HC4 596 aaKnown RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ENPP5Q9UJA9 477 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 RASD1Q9Y272 281 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ARGFXA6NJG6 315 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TRIM64CA6NLI5 447 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-202ENST00000355133 SLC43A1O75387 559 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 PAHP00439 452 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 PKDCCQ504Y2 493 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TMEM64Q6YI46 380 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 COX15Q7KZN9 410 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ADIPOR2Q86V24 386 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 SPARTQ8N0X7 666 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 DEDD2Q8WXF8 326 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 R3HDMLQ9H3Y0 253 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 MED20Q9H944 212 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 ZFP57Q9NU63 452 aa12.33□□□□□ -0.44
SCN8A-202ENST00000355133 TMEM100Q9NV29 134 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms