RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 NDUFB2O95178 105 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 IL9P15248 144 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 GPR3P46089 330 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 SMAD4Q13485 552 aaKnown RBP20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 IL18Q14116 193 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 HBMQ6B0K9 141 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 MZT2BQ6NZ67 158 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 CADM2Q8N3J6 435 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 NEK6Q9HC98 313 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 SYNDIG1LA6NDD5 238 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 HMX3A6NHT5 357 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 PLA2G10O15496 165 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF749O43361 778 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 NGFRP08138 427 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 GALNSP34059 522 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 HSD17B7P56937 341 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 FUT7Q11130 342 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 FHL1Q13642 323 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 FCRLBQ6BAA4 426 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 NPSR1Q6W5P4 371 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 VASH1Q7L8A9 365 aaPredicted RBP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ENKURQ8TC29 256 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 SGTBQ96EQ0 304 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 SENP5Q96HI0 755 aaPredicted RBP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF285Q96NJ3 590 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 UBL7Q96S82 380 aaPredicted RBP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 GAS2L1Q99501 681 aaPredicted RBP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ORAI3Q9BRQ5 295 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 PELOQ9BRX2 385 aaKnown RBP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 TTYH1Q9H313 450 aaPredicted RBP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 HTR3EA5X5Y0 456 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 CT45A8P0DMV1 189 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 CT45A9P0DMV2 189 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 DDOSTP39656 456 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 CAPZBP47756 277 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 CT45A2Q5DJT8 189 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ARL9Q6T311 187 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 SYT13Q7L8C5 426 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF440Q8IYI8 595 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ARL14Q8N4G2 192 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 MS4A15Q8N5U1 240 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 SPACA7Q96KW9 195 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 C4orf36Q96KX1 117 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 FRMD6Q96NE9 622 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ERMAPQ96PL5 475 aaPredicted RBP20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 MAP3K3Q99759 626 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ERVMER34-1Q9H9K5 563 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 SLC2A4RGQ9NR83 387 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 CHRNA9Q9UGM1 479 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 ICAM5Q9UMF0 924 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 PLCL2Q9UPR0 1127 aa20.48■□□□□ 0.87
NKX2-1-201ENST00000354822 HRKO00198 91 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 PROS1P07225 676 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 MRPL3P09001 348 aaKnown RBP20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 PRKAR1AP10644 381 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 SRFP11831 508 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 MAZP56270 477 aaKnown RBP20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF85Q03923 595 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 KIRREL2Q6UWL6 708 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 CYB561A3Q8NBI2 242 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 ABHD4Q8TB40 342 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF486Q96H40 463 aaPredicted RBP20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 ZC3HAV1LQ96H79 300 aaKnown RBP20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 PHF7Q9BWX1 381 aaPredicted RBP20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 OR10A5Q9H207 317 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 MMP28Q9H239 520 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 PRODH2Q9UF12 536 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 OR10H1Q9Y4A9 318 aa20.47■□□□□ 0.87
NKX2-1-201ENST00000354822 A0A087WUJ7 227 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 SERINC4A6NH21 518 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 B4DXG7 233 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 J3QLW9 94 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF217O75362 1048 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 CDC123O75794 336 aaPredicted RBP20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 CSTAP01040 98 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF19P17023 458 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 MYL9P24844 172 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 GKN2Q86XP6 184 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 OR5M3Q8NGP4 307 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 OIT3Q8WWZ8 545 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 ARSGQ96EG1 525 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 CCNL2Q96S94 520 aaPredicted RBP20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 RNF121Q9H920 327 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 DTX4Q9Y2E6 619 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 CLDN16Q9Y5I7 305 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 LILRA5A6NI73 299 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 FAM25AB3EWG3 89 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 FAM25CB3EWG5 89 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 FAM25GB3EWG6 89 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 TFECO14948 347 aaPredicted RBP20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 CSF2P04141 144 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 CLUP10909 449 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 NRG3P56975 720 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 BTG2P78543 158 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 MAT1AQ00266 395 aaKnown RBP20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 LGALS3BPQ08380 585 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 SERTAD2Q14140 314 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms