RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CSNK1A1LQ8N752 337 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 PHF21AQ96BD5 680 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 ABHD1Q96SE0 405 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 KCNJ15Q99712 375 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 DUSP22Q9NRW4 184 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 CACNA1CQ13936 2221 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 BRWD1Q9NSI6 2320 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 CYR61O00622 381 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 TSC22D2O75157 780 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 ALG10BQ5I7T1 473 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 FAAH2Q6GMR7 532 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 OR5H6Q8NGV6 325 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 RFT1Q96AA3 541 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 GDF15Q99988 308 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 SLC35A3Q9Y2D2 325 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 MAU2Q9Y6X3 613 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 EPOPA6NHQ4 379 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 CD3GP09693 182 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 PPM1FP49593 454 aaPredicted RBP18.05■□□□□ 0.48
COL13A1-201ENST00000354547 C1orf61Q13536 156 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 C1QTNF12Q5T7M4 302 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 TRILQ7L0X0 811 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 ZNF559Q9BR84 538 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 BRINP1O60477 761 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 ATP1B1P05026 303 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 SNRPBP14678 240 aaKnown RBP18.05■□□□□ 0.48
COL13A1-201ENST00000354547 BTBD16Q32M84 506 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 OR4D9Q8NGE8 314 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 ERVMER34-1Q9H9K5 563 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 CYSLTR2Q9NS75 346 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 ING3Q9NXR8 418 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 ADAM18Q9Y3Q7 739 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 SDK1Q7Z5N4 2213 aa18.05■□□□□ 0.48
COL13A1-201ENST00000354547 ZNF24P17028 368 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 RPS4Y1P22090 263 aaKnown RBP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 CFL1P23528 166 aaKnown RBP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 TNFRSF4P43489 277 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 PITPNBP48739 271 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 FAM53BQ14153 422 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 TMPRSS11FQ6ZWK6 438 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 LRRC28Q86X40 367 aaPredicted RBP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 IZUMO1Q8IYV9 350 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 DACT3Q96B18 629 aaPredicted RBP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 MARVELD1Q9BSK0 173 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 HCN3Q9P1Z3 774 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 HK1P19367 917 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 GRPRP30550 384 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 THBS2P35442 1172 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 RRAS2P62070 204 aaPredicted RBP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 MGAT2Q10469 447 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 MRPL28Q13084 256 aaKnown RBP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 YIF1BQ5BJH7 314 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 LYPD4Q6UWN0 246 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 Q6ZSR6 202 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 ACOT12Q8WYK0 555 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 MRGPRX1Q96LB2 322 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 CPNE7Q9UBL6 633 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 HSPB11Q9Y547 144 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 FAM171A2A8MVW0 826 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 SCO2O43819 266 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 IGKV1D-16P01601 117 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 PSMB10P40306 273 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 KIAA1024LP59773 190 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 ILF3Q12906 894 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 THOC7Q6I9Y2 204 aaKnown RBP18.04■□□□□ 0.48
COL13A1-201ENST00000354547 CA13Q8N1Q1 262 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 FAM60AQ9NP50 221 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 NUDT15Q9NV35 164 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 DTX4Q9Y2E6 619 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 IER3IP1Q9Y5U9 82 aa18.04■□□□□ 0.48
COL13A1-201ENST00000354547 TNFSF14O43557 240 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 FZD7O75084 574 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 CBX7O95931 251 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 HIST1H1CP16403 213 aaKnown RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 RPL4P36578 427 aaKnown RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 PRR23CQ6ZRP0 262 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 ZC3HAV1LQ96H79 300 aaKnown RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 AHCYL2Q96HN2 611 aaKnown RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 ORAI3Q9BRQ5 295 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 PLPP2O43688 288 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 GALR3O60755 368 aaPredicted RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 HNRNPA2B1P22626 353 aaKnown RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 ATP12AP54707 1039 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 BDH1Q02338 343 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 FAM205BPQ63HN1 556 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 METTL27Q8N6F8 245 aaPredicted RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 DEDD2Q8WXF8 326 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 ELSPBP1Q96BH3 223 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 ANKRD9Q96BM1 317 aaPredicted RBP18.03■□□□□ 0.48
COL13A1-201ENST00000354547 BEX1Q9HBH7 125 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 TMEM5Q9Y2B1 443 aa18.03■□□□□ 0.48
COL13A1-201ENST00000354547 A6NCN8 305 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 PTP4A3O75365 173 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 PEPDP12955 493 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 MAGEB1P43366 347 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 NTRK2Q16620 822 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 RTL4Q6ZR62 310 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 BAHD1Q8TBE0 780 aaPredicted RBP18.02■□□□□ 0.48
COL13A1-201ENST00000354547 GABRG3Q99928 467 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms