RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SLC43A2Q8N370 569 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 ACBD7Q8N6N7 88 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 OR4A4PQ8NGN8 299 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 OR4Q3Q8NH05 313 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 MYLIPQ8WY64 445 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 SLAMF9Q96A28 289 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 VRK1Q99986 396 aaPredicted RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 EGLN1Q9GZT9 426 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 XKR8Q9H6D3 395 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 TRIM36Q9NQ86 728 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 FAM96BQ9Y3D0 163 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 HELZP42694 1942 aaKnown RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 TRAPPC13A5PLN9 417 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 IMPA2O14732 288 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 BDH1Q02338 343 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 TWF1Q12792 350 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 ATXN7L3Q14CW9 347 aaPredicted RBP12.29□□□□□ -0.44
IFT88-202ENST00000351808 IER5LQ5T953 404 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 OLFML2AQ68BL7 652 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 CRTC1Q6UUV9 634 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 PXKQ7Z7A4 578 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 KCNRGQ8N5I3 272 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 PPCDCQ96CD2 204 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 MARS2Q96GW9 593 aaKnown RBP12.29□□□□□ -0.44
IFT88-202ENST00000351808 DERL3Q96Q80 235 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 SGK2Q9HBY8 427 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 SMCO4Q9NRQ5 59 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 STMND1H3BQB6 276 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 PPIHO43447 177 aaKnown RBP12.29□□□□□ -0.44
IFT88-202ENST00000351808 NARSO43776 548 aaKnown RBP12.29□□□□□ -0.44
IFT88-202ENST00000351808 GPR32O75388 356 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 GNSP15586 552 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 CR2P20023 1033 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 ITGA3P26006 1051 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 HTR1FP30939 366 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 TIA1P31483 386 aaKnown RBP eCLIP12.29□□□□□ -0.44
IFT88-202ENST00000351808 MECP2P51608 486 aaKnown RBP12.29□□□□□ -0.44
IFT88-202ENST00000351808 ELAVL2Q12926 359 aaKnown RBP12.29□□□□□ -0.44
IFT88-202ENST00000351808 PYY3Q5JQD4 70 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 OLIG3Q7RTU3 272 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 CPOQ8IVL8 374 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 SCN4BQ8IWT1 228 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 APCDD1Q8J025 514 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 POMGNT2Q8NAT1 580 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 OR6K2Q8NGY2 324 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 PMM1Q92871 262 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 SLC25A38Q96DW6 304 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 TOLLIPQ9H0E2 274 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 ACKR4Q9NPB9 350 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 NMRK2Q9NPI5 230 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 PPP1R14DQ9NXH3 145 aa12.29□□□□□ -0.44
IFT88-202ENST00000351808 STOX2Q9P2F5 926 aaPredicted RBP12.29□□□□□ -0.44
IFT88-202ENST00000351808 C17orf113A0A1B0GUU1 675 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 LOC390937A0A1W2PQ73 354 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 CXorf65A6NEN9 183 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 URADA6NGE7 173 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 SAP18O00422 153 aaKnown RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 GAPDHSO14556 408 aaPredicted RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 REM1O75628 298 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 PFN3P60673 137 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 ARHGAP1Q07960 439 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 TEAD2Q15562 447 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 LRRC37A5PQ49AS3 106 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 DPPA4Q7L190 304 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 LINC01599Q8WXQ3 324 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 ZBED3Q96IU2 234 aaPredicted RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 COL4A4P53420 1690 aaPredicted RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 DAPL1A0PJW8 107 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 DRGXA6NNA5 263 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 SURF4O15260 269 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 FLRT2O43155 660 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 BCL2L11O43521 198 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 TYRP1P17643 537 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 GSTM3P21266 225 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 MPIP34949 423 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 F2RL1P55085 397 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 STXBP1P61764 594 aaKnown RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 RNF4P78317 190 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 UBE2NLQ5JXB2 153 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 UNQ6126/PRO20091Q6UXV3 157 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 TMEM200AQ86VY9 491 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 OR10H4Q8NGA5 316 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 BRI3BPQ8WY22 251 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 CPNE4Q96A23 557 aaPredicted RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 TGIF2Q9GZN2 237 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 LAT2Q9GZY6 243 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 KLHL31Q9H511 634 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 OPA3Q9H6K4 179 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 MRPS30Q9NP92 439 aaKnown RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 HINT3Q9NQE9 182 aaKnown RBP12.28□□□□□ -0.44
IFT88-202ENST00000351808 CRLS1Q9UJA2 301 aa12.28□□□□□ -0.44
IFT88-202ENST00000351808 A0A087WUU8 490 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms