RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 CCDC86Q9H6F5 360 aaKnown RBP14.94□□□□□ -0.02
PTPN11-201ENST00000351677 COL22A1Q8NFW1 1626 aaPredicted RBP14.93□□□□□ -0.02
PTPN11-201ENST00000351677 GON4LQ3T8J9 2241 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 IFNA5P01569 189 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 ADH6P28332 368 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 PTPN6P29350 595 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 ADAMTSL4Q6UY14 1074 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 DLEU7Q6UYE1 221 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 DNAJC5GQ8N7S2 189 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 TOGARAM1Q9Y4F4 1720 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 ZNF736B4DX44 427 aaPredicted RBP14.93□□□□□ -0.02
PTPN11-201ENST00000351677 ELAVL4P26378 380 aaKnown RBP14.93□□□□□ -0.02
PTPN11-201ENST00000351677 LAX1Q8IWV1 398 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 SNIP1Q8TAD8 396 aaKnown RBP14.93□□□□□ -0.02
PTPN11-201ENST00000351677 OR5M11Q96RB7 305 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 NUDT22Q9BRQ3 303 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 RHBDD3Q9Y3P4 386 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 EVPLQ92817 2033 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 RPL34P49207 117 aaKnown RBP14.93□□□□□ -0.02
PTPN11-201ENST00000351677 GPR19Q15760 415 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 OR7E24Q6IFN5 339 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 FAM83FQ8NEG4 500 aaPredicted RBP14.93□□□□□ -0.02
PTPN11-201ENST00000351677 INPP5EQ9NRR6 644 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 CUTCQ9NTM9 273 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 ASB1Q9Y576 335 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 H7C1C5 153 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 MYOGP15173 224 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 LCN6P62502 163 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 SPOCK1Q08629 439 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 SIMC1Q8NDZ2 872 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 NEURL3Q96EH8 262 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 TNFRSF13CQ96RJ3 184 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 NXF5Q9H1B4 397 aaKnown RBP14.93□□□□□ -0.02
PTPN11-201ENST00000351677 NDUFAF4Q9P032 175 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 SLC6A5Q9Y345 797 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 SMCO3A2RU48 225 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 CSF1P09603 554 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 GPR18Q14330 331 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 NXPE3Q969Y0 559 aa14.93□□□□□ -0.02
PTPN11-201ENST00000351677 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 RFXAPO00287 272 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 SERPINA5P05154 406 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 AKAIN1P0CW23 69 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 RAB38P57729 211 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 LRRC28Q86X40 367 aaPredicted RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 BRIX1Q8TDN6 353 aaKnown RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ELOVL3Q9HB03 270 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 PGAP2Q9UHJ9 254 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 POLHQ9Y253 713 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 TNRC6CQ9HCJ0 1690 aaKnown RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 HRGP04196 525 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 BCL6P41182 706 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 FOLR3P41439 243 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 VASPP50552 380 aaPredicted RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ECH1Q13011 328 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 KIAA0895LQ68EN5 471 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 EGFL6Q8IUX8 553 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 C19orf47Q8N9M1 422 aaKnown RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 MYEOVQ96EZ4 313 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 TNFRSF12AQ9NP84 129 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 PLEK2Q9NYT0 353 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 COQ3Q9NZJ6 369 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ATG4BQ9Y4P1 393 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ZNF28P17035 718 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 TNFRSF4P43489 277 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 UBE2NP61088 152 aaKnown RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 HENMT1Q5T8I9 393 aaKnown RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ABHD17BQ5VST6 288 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ABHD12BQ7Z5M8 362 aaPredicted RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 TMEM255BQ8WV15 326 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ZNF587Q96SQ5 575 aaPredicted RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 HDAC8Q9BY41 377 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 SLA2Q9H6Q3 261 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 SLC1A3P43003 542 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 EEF1A2Q05639 463 aaKnown RBP14.92□□□□□ -0.02
PTPN11-201ENST00000351677 KATNB1Q9BVA0 655 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 A4GALTQ9NPC4 353 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 ZNF175Q9Y473 711 aa14.92□□□□□ -0.02
PTPN11-201ENST00000351677 NAP1L6A6NFF2 107 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 H3BNC9 293 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 IFNA2P01563 188 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 GABRA5P31644 462 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 OPRD1P41143 372 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 CSNK1G2P78368 415 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 NR0B2Q15466 257 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 SLC6A19Q695T7 634 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 CENPBD1B2RD01 187 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 ANKRD28O15084 1053 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 OR8G3PP0DMU2 310 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 POU3F1Q03052 451 aaPredicted RBP14.91□□□□□ -0.02
PTPN11-201ENST00000351677 MBOAT2Q6ZWT7 520 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 ZNF767PQ75MW2 155 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 RAB11FIP2Q7L804 512 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 OR6T1Q8NGN1 323 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 DCUN1D4Q92564 292 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 PLEKHJ1Q9NW61 149 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 SRPK3Q9UPE1 567 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 LSM5Q9Y4Y9 91 aaKnown RBP14.91□□□□□ -0.02
PTPN11-201ENST00000351677 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.91□□□□□ -0.02
PTPN11-201ENST00000351677 FAM230AA0A1W2PPH8 454 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms