RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 PRKAR1BP31321 381 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 HSD17B2P37059 387 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 CD96P40200 585 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 SELENOPP49908 381 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 MECP2P51608 486 aaKnown RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 CCR8P51685 355 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 RAB8AP61006 207 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 ZSWIM7Q19AV6 140 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 METRNLQ641Q3 311 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 ARL9Q6T311 187 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 B3GLCTQ6Y288 498 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 LINC00518Q8N0U6 118 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 LILRA3Q8N6C8 439 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 FOXJ1Q92949 421 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 ELMOD3Q96FG2 381 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 DDOQ99489 341 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 PHF7Q9BWX1 381 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 PCBD2Q9H0N5 130 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 OR52A5Q9H2C5 316 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 ISG20L2Q9H9L3 353 aaKnown RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 SEMA4GQ9NTN9 838 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 CNIH4Q9P003 139 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 ZNF175Q9Y473 711 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 SOCS6O14544 535 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 FLRT2O43155 660 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 GATBO75879 557 aaKnown RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 AQP8O94778 261 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 MT-ND4P03905 459 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 RPN2P04844 631 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 PCCBP05166 539 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 IGFBP4P22692 258 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 S100A11P31949 105 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 GDNFP39905 211 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 ARHGAP19Q14CB8 494 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 OLFML2AQ68BL7 652 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 GLDNQ6ZMI3 551 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 C17orf64Q86WR6 236 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 BVESQ8NE79 360 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 OR52L1Q8NGH7 329 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 OR51Q1Q8NH59 317 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 RAD51AP1Q96B01 352 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 SIPA1Q96FS4 1042 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 AMDHD1Q96NU7 426 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 SORBS1Q9BX66 1292 aaKnown RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 WASH6PQ9NQA3 447 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 SLC2A4RGQ9NR83 387 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 PCDHB16Q9NRJ7 776 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 TAS2R5Q9NYW4 299 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 MED11Q9P086 117 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 MGAT4CQ9UBM8 478 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 CA5BQ9Y2D0 317 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 PRELID3BQ9Y3B1 194 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 HRH3Q9Y5N1 445 aa14.7□□□□□ -0.06
HMGA1-202ENST00000347617 KLF2Q9Y5W3 355 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 SIRT4Q9Y6E7 314 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-202ENST00000347617 LAMA3Q16787 3333 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 A0A1W2PQU0 124 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 SLC22A23A1A5C7 686 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 OR2M5A3KFT3 312 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 MCRIP1C9JLW8 97 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 GABARAPH6UMI1 98 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ABCD4O14678 606 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 RNGTTO60942 597 aaKnown RBP14.69□□□□□ -0.06
HMGA1-202ENST00000347617 PAK4O96013 591 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-202ENST00000347617 HPXP02790 462 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 WNT1P04628 370 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ALDOBP05062 364 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ADPRHP54922 357 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 MEF2AQ02078 507 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-202ENST00000347617 POU4F2Q12837 409 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 FGL2Q14314 439 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 IRF4Q15306 451 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ACSM3Q53FZ2 586 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 CFAP77Q6ZQR2 320 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 BBS1Q8NFJ9 593 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 OR14C36Q8NHC7 312 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 GANCQ8TET4 914 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 RIT1Q92963 219 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 FBXW5Q969U6 566 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 SCARF2Q96GP6 870 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ZFP3Q96NJ6 502 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 GAS2L1Q99501 681 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ZNF416Q9BWM5 594 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ZDHHC5Q9C0B5 715 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 MBNL1Q9NR56 388 aaKnown RBP14.69□□□□□ -0.06
HMGA1-202ENST00000347617 OR6C2Q9NZP2 312 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 CYB5R1Q9UHQ9 305 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 ATPIF1Q9UII2 106 aa14.69□□□□□ -0.06
HMGA1-202ENST00000347617 FAM86C2PA6NEL3 165 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 NDUFS4O43181 175 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 CREBL2O60519 120 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-202ENST00000347617 GALR3O60755 368 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-202ENST00000347617 CH25HO95992 272 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 EPXP11678 715 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 CXCL2P19875 107 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 COL9A1P20849 921 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 PBLDP30039 288 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-202ENST00000347617 GCGRP47871 477 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 OR10A3P58181 314 aa14.68□□□□□ -0.06
HMGA1-202ENST00000347617 B2MP61769 119 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms