RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SIGLEC6O43699 453 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 CDK5R2Q13319 367 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 SF3A2Q15428 464 aaKnown RBP21.61■■□□□ 1.05
NPAS3-201ENST00000346562 HACD4Q5VWC8 232 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 FAM57BQ71RH2 274 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 RNF175Q8N4F7 328 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 OR5K2Q8NHB8 316 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 DDX31Q9H8H2 851 aaKnown RBP21.61■■□□□ 1.05
NPAS3-201ENST00000346562 OPN1LWP04000 364 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 PVRP15151 417 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 CTSCP53634 463 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 SLC22A6Q4U2R8 563 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 ZNF252P-AS1Q0IIN9 211 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 BRIX1Q8TDN6 353 aaKnown RBP21.61■■□□□ 1.05
NPAS3-201ENST00000346562 FRZBQ92765 325 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 ATOH1Q92858 354 aaPredicted RBP21.61■■□□□ 1.05
NPAS3-201ENST00000346562 UHRF1Q96T88 793 aaPredicted RBP21.61■■□□□ 1.05
NPAS3-201ENST00000346562 SIT1Q9Y3P8 196 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 BCAS1O75363 584 aaPredicted RBP21.61■■□□□ 1.05
NPAS3-201ENST00000346562 RPS2P15880 293 aaKnown RBP21.61■■□□□ 1.05
NPAS3-201ENST00000346562 ETV4P43268 484 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 STEAP1Q9UHE8 339 aa21.61■■□□□ 1.05
NPAS3-201ENST00000346562 PRKACBP22694 351 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 ZNF674Q2M3X9 581 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 ZNF789Q5FWF6 425 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 ZNF679Q8IYX0 411 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 LHX6Q9UPM6 363 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 EIF4EP06730 217 aaKnown RBP21.6■■□□□ 1.05
NPAS3-201ENST00000346562 GMPRP36959 345 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 THBS3P49746 956 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 TAS2R46P59540 309 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 DCDP81605 110 aaKnown RBP21.6■■□□□ 1.05
NPAS3-201ENST00000346562 RUNX2Q13950 521 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 VRK2Q86Y07 508 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 SUSD5O60279 629 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 CATR1Q13166 79 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 TSSK4Q6SA08 328 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 TAS1R1Q7RTX1 841 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 RLN3Q8WXF3 142 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 NOSIPQ9Y314 301 aaKnown RBP21.6■■□□□ 1.05
NPAS3-201ENST00000346562 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 OR5K3A6NET4 321 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 TNFSF12O43508 249 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 TPT1P13693 172 aaKnown RBP21.6■■□□□ 1.05
NPAS3-201ENST00000346562 PGGHGQ32M88 737 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 SLC35F3Q8IY50 421 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 LRRC18Q8N456 261 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 TMEM181Q9P2C4 612 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 hCG_1809904A0A1W2PP81 198 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 A0A1W2PPE2 198 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 A0A1W2PR64 198 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 A0A1W2PRV1 198 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 PTPN6P29350 595 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 HTR2BP41595 481 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 NT5C3BQ969T7 300 aa21.6■■□□□ 1.05
NPAS3-201ENST00000346562 FOXA1P55317 472 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 NFATC3Q12968 1075 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 MUL1Q969V5 352 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 ARPC5O15511 151 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 SPDEFO95238 335 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 ITGB2P05107 769 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 ITGAMP11215 1152 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 CCR7P32248 378 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 PTGER4P35408 488 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 F2RL1P55085 397 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 SLC35A1P78382 337 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 SMIM15Q7Z3B0 74 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 TMEFF1Q8IYR6 380 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 B3GNT7Q8NFL0 401 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 NDNFQ8TB73 568 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 ADAMTS14Q8WXS8 1223 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 CENPOQ9BU64 300 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 DECR2Q9NUI1 292 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 P2RX6O15547 441 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 C1SP09871 688 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 KITLGP21583 273 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 AOAHP28039 575 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 ANKRD60Q9BZ19 345 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 NME7Q9Y5B8 376 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 DNAJC25-GNG10A0A024R161 153 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 METTL15A6NJ78 407 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 STT3AP46977 705 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 TNFRSF17Q02223 184 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 OR6T1Q8NGN1 323 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 ZNF566Q969W8 418 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 MIB2Q96AX9 1013 aa21.59■■□□□ 1.05
NPAS3-201ENST00000346562 THAP7Q9BT49 309 aaPredicted RBP21.59■■□□□ 1.05
NPAS3-201ENST00000346562 HIDE1A8MVS5 230 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 ARPC1BO15143 372 aaKnown RBP21.58■■□□□ 1.05
NPAS3-201ENST00000346562 PSMB5P28074 263 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 GJA4P35212 333 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 TAS2R19P59542 299 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 SLC36A2Q495M3 483 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 ELP2Q6IA86 826 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 WDR83Q9BRX9 315 aaKnown RBP21.58■■□□□ 1.05
NPAS3-201ENST00000346562 PDLIM7Q9NR12 457 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 ATG4BQ9Y4P1 393 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 LRRC37A3O60309 1634 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 C1orf196B1AJZ1 125 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms