RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 MBD3L2Q8NHZ7 208 aaPredicted RBP14.5□□□□□ -0.09
RAB5C-201ENST00000346213 POC1BQ8TC44 478 aa14.5□□□□□ -0.09
RAB5C-201ENST00000346213 PNPT1Q8TCS8 783 aaKnown RBP14.5□□□□□ -0.09
RAB5C-201ENST00000346213 SFXN5Q8TD22 340 aa14.5□□□□□ -0.09
RAB5C-201ENST00000346213 SFXN2Q96NB2 322 aa14.5□□□□□ -0.09
RAB5C-201ENST00000346213 DUSP22Q9NRW4 184 aa14.5□□□□□ -0.09
RAB5C-201ENST00000346213 SAMD4AQ9UPU9 718 aaKnown RBP14.5□□□□□ -0.09
RAB5C-201ENST00000346213 ARHGAP21Q5T5U3 1957 aa14.5□□□□□ -0.09
RAB5C-201ENST00000346213 SAC3D1A6NKF1 404 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 CLCA1A8K7I4 914 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 AHRRA9YTQ3 701 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 SOCS2O14508 198 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 TNFRSF21O75509 655 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 ACTL6AO96019 429 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 HK1P19367 917 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 TBXA2RP21731 343 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 DSCR4P56555 118 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-201ENST00000346213 POU6F2P78424 691 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-201ENST00000346213 DCST2Q5T1A1 773 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 MEX3BQ6ZN04 569 aaKnown RBP14.49□□□□□ -0.09
RAB5C-201ENST00000346213 HMGN2P46Q86SG4 172 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 ASB5Q8WWX0 329 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 SH3YL1Q96HL8 342 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-201ENST00000346213 PYURFQ96I23 114 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 STACQ99469 402 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 BTBD2Q9BX70 525 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 ACTRT3Q9BYD9 372 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 BATF3Q9NR55 127 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 RPS6KA6Q9UK32 745 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 AP4B1Q9Y6B7 739 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 RNF103-CHMP3A0A140T963 221 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 C7orf72A4D263 438 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 MAGEA13PA6NCF6 341 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 FCMRO60667 390 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 NGFRP08138 427 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 SHC1P29353 583 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 PCGF2P35227 344 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 PRIM2P49643 509 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 ZNF117Q03924 483 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 RBBP4Q09028 425 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 BLMHQ13867 455 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 NRF1Q16656 503 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 SPDYE7PQ495Y7 208 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 C6orf120Q7Z4R8 191 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 GGNQ86UU5 652 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 OR56A1Q8NGH5 318 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 ZNF845Q96IR2 970 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-201ENST00000346213 TBL1XR1Q9BZK7 514 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 NEUROD4Q9HD90 331 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 CHST11Q9NPF2 352 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 OAZ3Q9UMX2 235 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 VDAC3Q9Y277 283 aa14.49□□□□□ -0.09
RAB5C-201ENST00000346213 MRPS18CQ9Y3D5 142 aaKnown RBP14.49□□□□□ -0.09
RAB5C-201ENST00000346213 CD8B2A6NJW9 211 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 TTC36A6NLP5 189 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 EFNA2O43921 213 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 MT-ND1P03886 318 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 OPN1LWP04000 364 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 NUDT7P0C024 238 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 COX6B1P14854 86 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 BMP5P22003 454 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 TOMM34Q15785 309 aaPredicted RBP14.48□□□□□ -0.09
RAB5C-201ENST00000346213 MAPK14Q16539 360 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 KLHL26Q53HC5 615 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 RAET1LQ5VY80 246 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 SAXO2Q658L1 398 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 ZCCHC12Q6PEW1 402 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 CBLL1Q75N03 491 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 EIF3MQ7L2H7 374 aaKnown RBP14.48□□□□□ -0.09
RAB5C-201ENST00000346213 EGFL6Q8IUX8 553 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 LACC1Q8IV20 430 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 UBQLNLQ8IYU4 475 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 GCNT2Q8N0V5 402 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 CBR4Q8N4T8 237 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 C11orf65Q8NCR3 313 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 RAB8BQ92930 207 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 TMEM38AQ9H6F2 299 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 NTN4Q9HB63 628 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 DNAJB9Q9UBS3 223 aa14.48□□□□□ -0.09
RAB5C-201ENST00000346213 FAF1Q9UNN5 650 aaPredicted RBP14.48□□□□□ -0.09
RAB5C-201ENST00000346213 HCRTR2O43614 444 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 TIMP3P35625 211 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 CHI3L1P36222 383 aaPredicted RBP14.47□□□□□ -0.09
RAB5C-201ENST00000346213 CRATP43155 626 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 MAPK11Q15759 364 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 PLPPR5Q32ZL2 321 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 LRRC23Q53EV4 343 aaPredicted RBP14.47□□□□□ -0.09
RAB5C-201ENST00000346213 COX20Q5RI15 118 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 GCNT6Q5T4J0 391 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 TNFAIP8L2Q6P589 184 aaPredicted RBP14.47□□□□□ -0.09
RAB5C-201ENST00000346213 ZPLD1Q8TCW7 415 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 ZG16BQ96DA0 208 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 SDF2Q99470 211 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 SPOCK3Q9BQ16 436 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 OR51I1Q9H343 314 aa14.47□□□□□ -0.09
RAB5C-201ENST00000346213 PDLIM1O00151 329 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 ETFAP13804 333 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 CHMP24386 653 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 PTGER4P35408 488 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 MAGEA2P43356 314 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms