RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 LSMEM1Q8N8F7 131 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 FAM181AQ8N9Y4 354 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 ANGPTL6Q8NI99 470 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 GRHL3Q8TE85 626 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 PMM1Q92871 262 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 MYDGFQ969H8 173 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 ZC3H10Q96K80 434 aaKnown RBP8.49□□□□□ -1.05
ATG4A-202ENST00000345734 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 PELOQ9BRX2 385 aaKnown RBP8.49□□□□□ -1.05
ATG4A-202ENST00000345734 LRRN3Q9H3W5 708 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 CLN6Q9NWW5 311 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 FLRT3Q9NZU0 649 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 CTSFQ9UBX1 484 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 KIF26BQ2KJY2 2108 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 COL5A1P20908 1838 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 IGHV5-10-1A0A0J9YXX1 117 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 NPIPB9F8W1W9 429 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 CDC42EP2O14613 210 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TLX2O43763 284 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 MPZL2O60487 215 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 MRPS14O60783 128 aaKnown RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SOX30O94993 753 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 DDAH2O95865 285 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 GSTM3P21266 225 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 ACAA2P42765 397 aaKnown RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TMBIM6P55061 237 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SLC37A1P57057 533 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 BIKQ13323 160 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF141Q15928 474 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 CLEC12AQ5QGZ9 265 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SYT6Q5T7P8 510 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SHISA6Q6ZSJ9 500 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SLC16A12Q6ZSM3 486 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 RASSF6Q6ZTQ3 369 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 MED25Q71SY5 747 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 COX15Q7KZN9 410 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SLC51BQ86UW2 128 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 STX19Q8N4C7 294 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 POGLUT1Q8NBL1 392 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SLC38A9Q8NBW4 561 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 OR4C3Q8NH37 302 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 PFN4Q8NHR9 129 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 OR6C1Q96RD1 312 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 VN1R1Q9GZP7 353 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SMOC1Q9H4F8 434 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SLC25A19Q9HC21 320 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SLC22A11Q9NSA0 550 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 C20orf141Q9NUB4 165 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TAS2R16Q9NYV7 291 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 PRODH2Q9UF12 536 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 ATPIF1Q9UII2 106 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TTC28Q96AY4 2481 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TCRBV16S1A1N1A0A5B0 115 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SH3D21A4FU49 640 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 KPNA4O00629 521 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TOX3O15405 576 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 NOL3O60936 208 aaKnown RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 GUSBP08236 651 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 OCM2P0CE71 109 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 OCMP0CE72 109 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 FUT1P19526 365 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 FPR3P25089 353 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 ATP12AP54707 1039 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 MLLT10P55197 1068 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 AQP6Q13520 282 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 FGFBP1Q14512 234 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 NSDHLQ15738 373 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TRIM61Q5EBN2 209 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 DTWD2Q8NBA8 298 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 OR4D9Q8NGE8 314 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 OR8J1Q8NGP2 316 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TEX47Q8TBZ9 253 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 IFI44Q8TCB0 444 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 SLC2A12Q8TD20 617 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF721Q8TF20 911 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 YIPF6Q96EC8 236 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 AIFM2Q9BRQ8 373 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 G6PC3Q9BUM1 346 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 NUDT9Q9BW91 350 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 ARMC7Q9H6L4 198 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 TESQ9UGI8 421 aaKnown RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 IL20RAQ9UHF4 553 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF223Q9UK11 482 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.48□□□□□ -1.05
ATG4A-202ENST00000345734 CLCA3PQ9Y6N3 262 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 GPR179Q6PRD1 2367 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 PCNX3Q9H6A9 2034 aa8.48□□□□□ -1.05
ATG4A-202ENST00000345734 A0A1B0GWA3 101 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TRIM64BA6NI03 449 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 M0R296 226 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 PRODHO43272 600 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 FMO6PO60774 539 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 IGKV3-11P04433 115 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ANKRD34CP0C6C1 535 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 CTRB1P17538 263 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 CCNA2P20248 432 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 MAKP20794 623 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 STAT5AP42229 794 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms