RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 B3GNT2Q9NY97 397 aa14.45□□□□□ -0.1
PTPRU-201ENST00000345512 NUP50Q9UKX7 468 aa14.45□□□□□ -0.1
PTPRU-201ENST00000345512 HCRTR2O43614 444 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 SNAPC5O75971 98 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 SPDEFO95238 335 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PVRP15151 417 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 CCKBRP32239 447 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 VEGFCP49767 419 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 GALEQ14376 348 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 RPE65Q16518 533 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 GLT8D1Q68CQ7 371 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 TCTE3Q8IZS6 198 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 SMAP2Q8WU79 429 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PEX11GQ96HA9 241 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 LMF1Q96S06 567 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 EMC7Q9NPA0 242 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 STARD5Q9NSY2 213 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PLEKHM1Q9Y4G2 1056 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PIKFYVEQ9Y2I7 2098 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 TRIM64BA6NI03 449 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 EIF1AYO14602 144 aaKnown RBP14.44□□□□□ -0.1
PTPRU-201ENST00000345512 LIMS3P0CW19 117 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 LIMS4P0CW20 117 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PUDPQ08623 228 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 MAPK14Q16539 360 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 ESPNLQ6ZVH7 1005 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 NUP54Q7Z3B4 507 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 BEST3Q8N1M1 668 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 SLC35A4Q96G79 324 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PLEKHB1Q9UF11 243 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-201ENST00000345512 TMEM14AQ9Y6G1 99 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 TVP23AA6NH52 213 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PRRT4C9JH25 899 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 GOSR2O14653 212 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 PLATP00750 562 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 IGFALSP35858 605 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 FRKP42685 505 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-201ENST00000345512 HYAL4Q2M3T9 481 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 FAM180AQ6UWF9 173 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 ADAMTSL4Q6UY14 1074 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 OR5J2Q8NH18 312 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 CNRIP1Q96F85 164 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-201ENST00000345512 FKBP14Q9NWM8 211 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 KCMF1Q9P0J7 381 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 KCNE3Q9Y6H6 103 aa14.44□□□□□ -0.1
PTPRU-201ENST00000345512 LCTP09848 1927 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 SURF4O15260 269 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 CDC40O60508 579 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 KCNJ13O60928 360 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 OLFM2O95897 454 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 HRGP04196 525 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 SBK2P0C263 348 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 F3P13726 295 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 EIF1AXP47813 144 aaKnown RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 C1orf61Q13536 156 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 DUSP5Q16690 384 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 ZNF836Q6ZNA1 936 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RFPL4BQ6ZWI9 263 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 ZNF101Q8IZC7 436 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 MFSD9Q8NBP5 474 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 TIMM29Q9BSF4 260 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 COPS7AQ9UBW8 275 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 REV1Q9UBZ9 1251 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RGS13O14921 159 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 EIF4EP06730 217 aaKnown RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RNH1P13489 461 aaKnown RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 DGCR2P98153 550 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 TMEM201Q5SNT2 666 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 CD276Q5ZPR3 534 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 OR52R1Q8NGF1 315 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 OR2T4Q8NH00 348 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 PDCD1LG2Q9BQ51 273 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 TAS2R8Q9NYW2 309 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 NPFFR2Q9Y5X5 522 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 CCDC88CQ9P219 2028 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 GPR89AB7ZAQ6 455 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 F5H0A9 414 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 GPR89BP0CG08 455 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RFX2P48378 723 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 ZNF79Q15937 498 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RPL22L1Q6P5R6 122 aaKnown RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 AMER3Q8N944 861 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 TAPBPLQ9BX59 468 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 PLEKHA1Q9HB21 404 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 PRSS16Q9NQE7 514 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 TESQ9UGI8 421 aaKnown RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 SGK494L7N484 410 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RDH16O75452 317 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 PKLRP30613 574 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 TNFRSF17Q02223 184 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 OPCMLQ14982 345 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 ZXDCQ2QGD7 858 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 TCTE1Q5JU00 501 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 SPAG16Q8N0X2 631 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 SPERTQ8NA61 448 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 CMKLR1Q99788 373 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RABL2AQ9UBK7 228 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 RABL2BQ9UNT1 228 aa14.43□□□□□ -0.1
PTPRU-201ENST00000345512 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-201ENST00000345512 MAGEB4O15481 346 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms