RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ERVK-19Q9WJR5 959 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 POLHQ9Y253 713 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 OR10H1Q9Y4A9 318 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 FOXS1O43638 330 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 PTP4A3O75365 173 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 MT-ND5P03915 603 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 IFNA16P05015 189 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 SBK2P0C263 348 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 KIR2DL3P43628 341 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 OR10A3P58181 314 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 SF3B4Q15427 424 aaKnown RBP eCLIP13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 LCN1P1Q5VSP4 162 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 SSX6Q7RTT6 188 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 OR52E2Q8NGJ4 325 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 OR13C5Q8NGS8 318 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 CLIP3Q96DZ5 547 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 KLHDC7BQ96G42 594 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 VSTM2LQ96N03 204 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 DGAT2Q96PD7 388 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 JAM3Q9BX67 310 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 BEX2Q9BXY8 128 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 ADGRL4Q9HBW9 690 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 KLHL1Q9NR64 748 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 HTR3EA5X5Y0 456 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 OR5M3Q8NGP4 307 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 OR5J2Q8NH18 312 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 MMABQ96EY8 250 aaPredicted RBP13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 KCNN2Q9H2S1 579 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 PRTFDC1Q9NRG1 225 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 ZMIZ1Q9ULJ6 1067 aa13.71□□□□□ -0.21
VIPAS39-202ENST00000343765 A0A1W2PPK0 400 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 B4DXG7 233 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 HK1P19367 917 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 PYCR1P32322 319 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 NAA10P41227 235 aaPredicted RBP13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 EVX1P49640 407 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 TBRG1Q3YBR2 411 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 MZT2AQ6P582 158 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 ARHGEF39Q8N4T4 335 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 OR4C3Q8NH37 302 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF486Q96H40 463 aaPredicted RBP13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 LMF1Q96S06 567 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 TRIM2Q9C040 744 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 PPP1R3EQ9H7J1 279 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 POLE3Q9NRF9 147 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 ADAM18Q9Y3Q7 739 aa13.71□□□□□ -0.22
VIPAS39-202ENST00000343765 A0A1W2PRG6 482 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 GSTT2P0CG29 244 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 GSTT2BP0CG30 244 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 PSKH1P11801 424 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 HIST1H1CP16403 213 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 SLC6A6P31641 620 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF85Q03923 595 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 FAAH2Q6GMR7 532 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 RTL4Q6ZR62 310 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 CEACAM19Q7Z692 300 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 CCDC86Q9H6F5 360 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 SOHLH2Q9NX45 425 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 MAU2Q9Y6X3 613 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 IMPA2O14732 288 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 PEPDP12955 493 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 ELK1P19419 428 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 MYL9P24844 172 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 MAOBP27338 520 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 INPP1P49441 399 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 CCR5P51681 352 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 PRTGQ2VWP7 1150 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 TP53I3Q53FA7 332 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 SLC7A5P1Q8MH63 180 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 SCAIQ8N9R8 606 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 CHAC2Q8WUX2 184 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 KIAA1143Q96AT1 154 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 EFHD2Q96C19 240 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 NECTIN4Q96NY8 510 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 Q9N2J8 555 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 EXTL2Q9UBQ6 330 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 NUFIP1Q9UHK0 495 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 N6AMT1Q9Y5N5 214 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 IER3IP1Q9Y5U9 82 aa13.7□□□□□ -0.22
VIPAS39-202ENST00000343765 TRIOBPQ9H2D6 2365 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 A0A0B4J293 547 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 MCIDASD6RGH6 385 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 CSTAP01040 98 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 SLC2A5P22732 501 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 BDH1Q02338 343 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 FHL1Q13642 323 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 TGM7Q96PF1 710 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 TP63Q9H3D4 680 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 WSB2Q9NYS7 404 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 NPAP1Q9NZP6 1156 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms