RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 MC1RQ01726 317 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 PON3Q15166 354 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RHOUQ7L0Q8 258 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 ABHD13Q7L211 337 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 MEPCEQ7L2J0 689 aaKnown RBP17.19■□□□□ 0.34
SMPD1-201ENST00000342245 PHYHIPQ92561 330 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RAB7BQ96AH8 199 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 S100A16Q96FQ6 103 aaKnown RBP17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RSPO3Q9BXY4 272 aaPredicted RBP17.19■□□□□ 0.34
SMPD1-201ENST00000342245 TLNRD1Q9H1K6 362 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 NEUROD4Q9HD90 331 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 MIEF1Q9NQG6 463 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 P2RX2Q9UBL9 471 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 OR10H1Q9Y4A9 318 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 B3GAT3O94766 335 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 PCDH8O95206 1070 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 CD8AP01732 235 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 PPP2R1BP30154 601 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 SLC11A2P49281 568 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 RIDAP52758 137 aaKnown RBP17.18■□□□□ 0.34
SMPD1-201ENST00000342245 NDUFAF6Q330K2 333 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 UAP1L1Q3KQV9 507 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 DMKNQ6E0U4 476 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-201ENST00000342245 OR2T33Q8NG76 320 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 CPNE4Q96A23 557 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-201ENST00000342245 PGLYRP3Q96LB9 341 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 GPR37O15354 613 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 LILRB5O75023 590 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 SLC25A12O75746 678 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 SMIM10L2AP0DMW4 78 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 SMIM10L2BP0DMW5 78 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 MUC1P15941 1255 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-201ENST00000342245 CERS1P27544 350 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 TAS2R50P59544 299 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 OC90Q02509 493 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-201ENST00000342245 FABP9Q0Z7S8 132 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 RAB33AQ14088 237 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 GLT8D1Q68CQ7 371 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 IL34Q6ZMJ4 242 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 ARL6IP6Q8N6S5 226 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 BBS1Q8NFJ9 593 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 SLC25A28Q96A46 364 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMPD1-201ENST00000342245 LINC00597Q9H2U6 94 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 KLHL31Q9H511 634 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 TAS2R8Q9NYW2 309 aa17.18■□□□□ 0.34
SMPD1-201ENST00000342245 ZFP37Q9Y6Q3 630 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-201ENST00000342245 LRIT2A6NDA9 550 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 GNSP15586 552 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 AGAP20933 346 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 CSNK1EP49674 416 aaKnown RBP17.17■□□□□ 0.34
SMPD1-201ENST00000342245 CCL23P55773 120 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 RAB2AP61019 212 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 C2orf68Q2NKX9 166 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 DCAF12L2Q5VW00 463 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 RPL13AP3Q6NVV1 102 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 CPOQ8IVL8 374 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 DCUN1D3Q8IWE4 304 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 TMEM68Q96MH6 324 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 WDR77Q9BQA1 342 aaPredicted RBP17.17■□□□□ 0.34
SMPD1-201ENST00000342245 WFDC6Q9BQY6 131 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF471Q9BX82 626 aaPredicted RBP17.17■□□□□ 0.34
SMPD1-201ENST00000342245 TEX101Q9BY14 249 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 KATNBL1Q9H079 304 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 KLK11Q9UBX7 282 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 PIKFYVEQ9Y2I7 2098 aa17.17■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-201ENST00000342245 ARL5CA6NH57 179 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 WASH3PC4AMC7 463 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 HMGN4O00479 90 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 SOCS6O14544 535 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 SEPT4O43236 478 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 FMO6PO60774 539 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 SH3BGRLO75368 114 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 SNAI1O95863 264 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-201ENST00000342245 TBX18O95935 607 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 CH25HO95992 272 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 HOXC4P09017 264 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-201ENST00000342245 NT5EP21589 574 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 ACTR1BP42025 376 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 AP1S1P61966 158 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF177Q13360 481 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-201ENST00000342245 LPCAT3Q6P1A2 487 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 MUC20Q8N307 709 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-201ENST00000342245 BBS10Q8TAM1 723 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 SLC6A16Q9GZN6 736 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 HINT3Q9NQE9 182 aaKnown RBP17.16■□□□□ 0.34
SMPD1-201ENST00000342245 TNFSF18Q9UNG2 199 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 TRAV14DV4A0A0A6YYC5 116 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 LOC390937A0A1W2PQ73 354 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 H3BNC9 293 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 UCHL1P09936 223 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 P2RX1P51575 399 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 NIPAL3Q6P499 406 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 TMEM71Q6P5X7 295 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 FAM199XQ6PEV8 388 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-201ENST00000342245 SSX9Q7RTT3 188 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 C6orf120Q7Z4R8 191 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 SLC43A2Q8N370 569 aa17.16■□□□□ 0.34
SMPD1-201ENST00000342245 OR6T1Q8NGN1 323 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms