RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 MRPS2Q9Y399 296 aaKnown RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ADAM18Q9Y3Q7 739 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TRBV2A0A0J9YWF9 115 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 SEC14L5O43304 696 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 RASGRP1O95267 797 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 SBK2P0C263 348 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF250P15622 560 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 GALEQ14376 348 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZIC1Q15915 447 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 AGBL4Q5VU57 503 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TANGO2Q6ICL3 276 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 MRM1Q6IN84 353 aaKnown RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF767PQ75MW2 155 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TRILQ7L0X0 811 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 CDH24Q86UP0 819 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 GATSQ8NAP1 163 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF784Q8NCA9 323 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 FGF13Q92913 245 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 NARFLQ9H6Q4 476 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 IL21RQ9HBE5 538 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TMEM27Q9HBJ8 222 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 SLC27A6Q9Y2P4 619 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TRIOO75962 3097 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 SPEGQ15772 3267 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 P2RX6O15547 441 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 RCBTB2O95199 551 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 WNT1P04628 370 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 CEACAM5P06731 702 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ADRB1P08588 477 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF136P52737 540 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ERVK-21P61565 698 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 TMEM44Q2T9K0 475 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 PATE1Q8WXA2 126 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 METTL17Q9H7H0 456 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-201ENST00000340437 KNTC1P50748 2209 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 POM121BA6NF01 834 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 LEUTXA8MZ59 168 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 FLRT2O43155 660 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 KHDRBS3O75525 346 aaKnown RBP13.32□□□□□ -0.28
CPSF7-201ENST00000340437 TIMP1P01033 207 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF3P17036 446 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ENPP1P22413 925 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 OC90Q02509 493 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-201ENST00000340437 PLA1AQ53H76 456 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 WDR45BQ5MNZ6 344 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 TIGD3Q6B0B8 471 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 SLC25A25Q6KCM7 469 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 VN1R4Q7Z5H5 301 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF680Q8NEM1 530 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 MOAP1Q96BY2 351 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ZC3HAV1LQ96H79 300 aaKnown RBP13.32□□□□□ -0.28
CPSF7-201ENST00000340437 PRSS27Q9BQR3 290 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 NT5DC2Q9H857 520 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 KCNE5Q9UJ90 142 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 RCE1Q9Y256 329 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 IER3IP1Q9Y5U9 82 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 STX11O75558 287 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 GDI2P50395 445 aaKnown RBP13.32□□□□□ -0.28
CPSF7-201ENST00000340437 ST3GAL2Q16842 350 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 DEFB110Q30KQ9 67 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 PRRT3Q5FWE3 981 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 FAAH2Q6GMR7 532 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 PYHIN1Q6K0P9 492 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 PARGQ86W56 976 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 LGALS14Q8TCE9 139 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 TOX2Q96NM4 488 aa13.32□□□□□ -0.28
CPSF7-201ENST00000340437 NKX3-1Q99801 234 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-201ENST00000340437 SLC22A31A6NKX4 558 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 CACNB4O00305 520 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-201ENST00000340437 SMAD9O15198 467 aaKnown RBP13.31□□□□□ -0.28
CPSF7-201ENST00000340437 B3GALT2O43825 422 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 HLA-DQB1P01920 261 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 HPXP02790 462 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 IL9P15248 144 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 NPR2P20594 1047 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 CCR4P51679 360 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 TOR2AQ5JU69 321 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 SIGIRRQ6IA17 410 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 SFTPA2Q8IWL1 248 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 DEFB119Q8N690 84 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 PIGUQ9H490 435 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 ZMIZ1Q9ULJ6 1067 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 STX4Q12846 297 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 AMZ1Q400G9 498 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 MRGPREQ86SM8 312 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 FTMTQ8N4E7 242 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF707Q96C28 371 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-201ENST00000340437 SLC17A9Q9BYT1 436 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 A0A087WV48 116 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 BHLHE40O14503 412 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 SLC22A5O76082 557 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 CA3P07451 260 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 RBMS1P29558 406 aaKnown RBP13.31□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF85Q03923 595 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 ESCO2Q56NI9 601 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 KANSL1Q7Z3B3 1105 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 UBE2Q1Q7Z7E8 422 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 RPLP0P6Q8NHW5 317 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 TIMP4Q99727 224 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms