RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TPST1O60507 370 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 GCM2O75603 506 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 SERPINB7O75635 380 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 RCBTB2O95199 551 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 TMIGD3P0DMS9 266 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 PRG2P13727 222 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 UQCRBP14927 111 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 PCGF2P35227 344 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 APOBEC1P41238 236 aaKnown RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 PCBP3P57721 371 aaKnown RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 FOXF2Q12947 444 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 GLIPR1L2Q4G1C9 344 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 HBMQ6B0K9 141 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 PPP4R4Q6NUP7 873 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 C3orf33Q6P1S2 294 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 ZNF550Q7Z398 422 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 GRINAQ7Z429 371 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 COMTD1Q86VU5 262 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 LSRQ86X29 649 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 CALHM3Q86XJ0 350 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 GCNT2Q8N0V5 402 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 FNDC9Q8TBE3 224 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 INTS12Q96CB8 462 aaKnown RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 EFCAB1Q9HAE3 211 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 CTPS2Q9NRF8 586 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 SERINC1Q9NRX5 453 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 PAQR5Q9NXK6 330 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 ZNF629Q9UEG4 869 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 ADAM21Q9UKJ8 722 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 ZNF175Q9Y473 711 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 NBPF19A0A087WUL8 3843 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 A0A1W2PNR3 127 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 CCT8L1PA6NM43 557 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 SHOX2O60902 331 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-201ENST00000340074 DCTN3O75935 186 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 MFN2O95140 757 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 FAM107AO95990 144 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 BMP5P22003 454 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 CTSSP25774 331 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 SLC1A3P43003 542 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 NUDT2P50583 147 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 AGFG1P52594 562 aaKnown RBP13.68□□□□□ -0.22
UBE3B-201ENST00000340074 CARD18P57730 90 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 DMTNQ08495 405 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 VMACQ2NL98 169 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 PDSS1Q5T2R2 415 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 DHRS4L2Q6PKH6 230 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 ADGRG3Q86Y34 549 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 ARMC8Q8IUR7 673 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 SLC30A8Q8IWU4 369 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 SMYD1Q8NB12 490 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 RELL2Q8NC24 303 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-201ENST00000340074 OSTF1Q92882 214 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 ZFP3Q96NJ6 502 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 LRRC37BQ96QE4 947 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 GPATCH1Q9BRR8 931 aaKnown RBP13.68□□□□□ -0.22
UBE3B-201ENST00000340074 COQ10BQ9H8M1 238 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 KCNJ16Q9NPI9 418 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 CHRNA9Q9UGM1 479 aa13.68□□□□□ -0.22
UBE3B-201ENST00000340074 TMED7-TICAM2A0A0A6YYA0 188 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 PRORSD1PA6NEY8 169 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 C19orf84I3L1E1 186 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 M0QX08 132 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 DVL2O14641 736 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 AQP8O94778 261 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 OPN1SWP03999 348 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 CCNA2P20248 432 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 TACR3P29371 465 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 PRDX6P30041 224 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 SLC7A1P30825 629 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 HTR3AP46098 478 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 POLR2HP52434 150 aaKnown RBP13.67□□□□□ -0.22
UBE3B-201ENST00000340074 HOXC5Q00444 222 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 TFF3Q07654 80 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 INTS11Q5TA45 600 aaKnown RBP13.67□□□□□ -0.22
UBE3B-201ENST00000340074 CADM2Q8N3J6 435 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 ANKS4BQ8N8V4 417 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 SLC35B4Q969S0 331 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 REXO5Q96IC2 774 aaKnown RBP13.67□□□□□ -0.22
UBE3B-201ENST00000340074 OR5B2Q96R09 309 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 HOPXQ9BPY8 73 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-201ENST00000340074 SRXN1Q9BYN0 137 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 PRRG4Q9BZD6 226 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 RNF122Q9H9V4 155 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 CMTM6Q9NX76 183 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 OSGIN1Q9UJX0 560 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 MCTS1Q9ULC4 181 aaKnown RBP13.67□□□□□ -0.22
UBE3B-201ENST00000340074 TMED7Q9Y3B3 224 aa13.67□□□□□ -0.22
UBE3B-201ENST00000340074 SYNGR4O95473 234 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 OPRM1P35372 400 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 CPA2P48052 419 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 COPZ1P61923 177 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 DUSP7Q16829 419 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 SLC25A35Q3KQZ1 300 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 SYT14P1Q58G82 188 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 GKAP1Q5VSY0 366 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-201ENST00000340074 SP5Q6BEB4 398 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-201ENST00000340074 WBP2NLQ6ICG8 309 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms