RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 EGR4Q05215 589 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SKP2Q13309 424 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 KLHL12Q53G59 568 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC25A30Q5SVS4 291 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 BICRALQ6AI39 1079 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 BMP8AQ7Z5Y6 402 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 KMT5CQ86Y97 462 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 CYP4Z2PQ8N1L4 340 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 FAM181AQ8N9Y4 354 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 OR7G1Q8NGA0 311 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 NR4A3Q92570 626 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ART5Q96L15 291 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF578Q96N58 590 aaPredicted RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 MOGAT1Q96PD6 335 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC38A2Q96QD8 506 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 DCLRE1CQ96SD1 692 aaKnown RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF649Q9BS31 505 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 DCSTAMPQ9H295 470 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 OR51V1Q9H2C8 321 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 RXFP3Q9NSD7 469 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF346Q9UL40 294 aaKnown RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 KDM4EB2RXH2 506 aaPredicted RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 MCIDASD6RGH6 385 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 DVL2O14641 736 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 MAGEB3O15480 346 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 MAGEB4O15481 346 aaPredicted RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 MRPL3P09001 348 aaKnown RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 PNLIPP16233 465 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 GALNSP34059 522 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC16A1P53985 500 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF117Q03924 483 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF791Q3KP31 576 aaPredicted RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ULK3Q6PHR2 472 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 LYPD4Q6UWN0 246 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SLITRK4Q8IW52 837 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 RNF113BQ8IZP6 322 aaKnown RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 CARFQ8N187 725 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 OR51G2Q8NGK0 314 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ZPLD1Q8TCW7 415 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 BRIX1Q8TDN6 353 aaKnown RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 FCGR1BQ92637 280 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 PLEKHA8Q96JA3 519 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ZC3H10Q96K80 434 aaKnown RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 TTTY10Q9BZA0 68 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 TRIM2Q9C040 744 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ARRDC1-AS1Q9H2J1 176 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 FN3KQ9H479 309 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ISG20L2Q9H9L3 353 aaKnown RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 MKKSQ9NPJ1 570 aaPredicted RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 ENAMQ9NRM1 1142 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 QPCTLQ9NXS2 382 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SEC14L4Q9UDX3 406 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 RARRES3Q9UL19 164 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 PCDHGA3Q9Y5H0 932 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 A0A087WUJ7 227 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 TMEM221A6NGB7 291 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 FRG2CA6NGY1 282 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 TMEM200CA6NKL6 621 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 EFCAB7A8K855 629 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 M0R296 226 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 GTPBP1O00178 669 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SCDO00767 359 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PLD2O14939 933 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC22A1O15245 554 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 HCRTR2O43614 444 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SCO2O43819 266 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SERPINI2O75830 405 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 BMP7P18075 431 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 LTBQ06643 244 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CRMP1Q14194 572 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF385CQ66K41 422 aaPredicted RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CXXC5Q7LFL8 322 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 LNX2Q8N448 690 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DTWD2Q8NBA8 298 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC37A3Q8NCC5 494 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 OR9Q1Q8NGQ5 310 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 OR4K13Q8NH42 304 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DAZLQ92904 295 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 OMA1Q96E52 524 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 TIMP4Q99727 224 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 TM9SF2Q99805 663 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 RACGAP1Q9H0H5 632 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 TPK1Q9H3S4 243 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 EXOSC4Q9NPD3 245 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS6KB2Q9UBS0 482 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DIMT1Q9UNQ2 313 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 HRH3Q9Y5N1 445 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 BLOC1S5-TXNDC5H3BN57 136 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CCRL2O00421 344 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 TSPAN2O60636 221 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SOX30O94993 753 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 RAB36O95755 333 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SCG5P05408 212 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 HEXBP07686 556 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CELA2AP08217 269 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 UBL4AP11441 157 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 HIST1H1CP16403 213 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CRYBB2P43320 205 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms