RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 FOXG1P55316 489 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 SELENBP1Q13228 472 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 CAPRIN1Q14444 709 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 GPAT3Q53EU6 434 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 ANXA8L1Q5VT79 327 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 ZNF621Q6ZSS3 439 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 TMPPEQ6ZT21 453 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 EIF3MQ7L2H7 374 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 BIVMQ86UB2 503 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 ADGRG3Q86Y34 549 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 CCDC103Q8IW40 242 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 PNPT1Q8TCS8 783 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 TESCQ96BS2 214 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 NEURL3Q96EH8 262 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 ARL5BQ96KC2 179 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 TMEM204Q9BSN7 226 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 OR11A1Q9GZK7 315 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 SAP130Q9H0E3 1048 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 SLC6A13Q9NSD5 602 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 GPR45Q9Y5Y3 372 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 ANK3Q12955 4377 aaKnown RBP11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 SULT2B1O00204 365 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 CLOCKO15516 846 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 KIAA0513O60268 411 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 ZNF500O60304 480 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 CYTIPO60759 359 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 FESP07332 822 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 CHRM4P08173 479 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 PGCP20142 388 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 KCNJ10P78508 379 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 MAPK11Q15759 364 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 ATAD3BQ5T9A4 648 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 BHLHA15Q7RTS1 189 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 LRRC75A-AS1Q8N1F1 130 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 STEAP2Q8NFT2 490 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 ZNF563Q8TA94 476 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 CCDC115Q96NT0 180 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 CCDC106Q9BWC9 280 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 BCO1Q9HAY6 547 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 AIG1Q9NVV5 245 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 LAMP3Q9UQV4 416 aa11.84□□□□□ -0.51
NUDCD3-201ENST00000338427 CADP27708 2225 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 A0A1W2PR80 420 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 TMEM120BA0PK00 339 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 E9PBE3 544 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 HS3ST1O14792 307 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 AK1P00568 194 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 IL32P24001 234 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 OR3A2P47893 321 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 IDH2P48735 452 aaKnown RBP11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 ITGADQ13349 1161 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 SLC9B1Q4ZJI4 515 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 NCMAPQ5T1S8 102 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 AP1ARQ63HQ0 302 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 NXNQ6DKJ4 435 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 SEZ6L2Q6UXD5 910 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 SLC43A2Q8N370 569 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 FAM71CQ8NEG0 241 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 ST8SIA1Q92185 356 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 OR52E6Q96RD3 313 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 HDHD5Q9BXW7 423 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 SLC38A1Q9H2H9 487 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 SERINC1Q9NRX5 453 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 BTNL2Q9UIR0 455 aa11.83□□□□□ -0.52
NUDCD3-201ENST00000338427 ALPK2Q86TB3 2170 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 SNNO75324 88 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 PGRP06401 933 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 SOD3P08294 240 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 CLNS1AP54105 237 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 OR2B6P58173 313 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 STK11Q15831 433 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 GTDC1Q4AE62 458 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 SYT14P1Q58G82 188 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 OGFOD2Q6N063 350 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 C3orf33Q6P1S2 294 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 MAVSQ7Z434 540 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 SPATA19Q7Z5L4 167 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 MTDHQ86UE4 582 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 ZNF100Q8IYN0 542 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 ZNF611Q8N823 705 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 MAPK1IP1LQ8NDC0 245 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 PIWIL2Q8TC59 973 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 TMEM171Q8WVE6 324 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 TMEM234Q8WY98 164 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 HSD17B8Q92506 261 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 KISS1RQ969F8 398 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 COX4I2Q96KJ9 171 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 PANX1Q96RD7 426 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 TACO1Q9BSH4 297 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 C1QTNF6Q9BXI9 259 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 FANCFQ9NPI8 374 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
NUDCD3-201ENST00000338427 KLHL9Q9P2J3 617 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms