RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KLHL36Q8N4N3 616 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 PHOSPHO1Q8TCT1 267 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 KISS1RQ969F8 398 aaPredicted RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 CTHRC1Q96CG8 243 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 NECTIN4Q96NY8 510 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ADOQ96SZ5 270 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 SIAEQ9HAT2 523 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 BOLA1Q9Y3E2 137 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 CLDN16Q9Y5I7 305 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 CHURC1-FNTBB4DL54 471 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 TMEM150CB9EJG8 249 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 TAF4O00268 1085 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 SELENOFO60613 162 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 SLC35E2P0CK97 266 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 HTR1FP30939 366 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 RFX2P48378 723 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 FNTBP49356 437 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 IL18Q14116 193 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ZNHIT3Q15649 155 aaPredicted RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 CNIH2Q6PI25 160 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 QSOX2Q6ZRP7 698 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 MED25Q71SY5 747 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 BCORP1Q8N888 145 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 OR4C6Q8NH72 309 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 MOSPD2Q8NHP6 518 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ASB12Q8WXK4 309 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 VSTM2LQ96N03 204 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 TEAD3Q99594 435 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 OR10A5Q9H207 317 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 MCCC2Q9HCC0 563 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 FGF20Q9NP95 211 aaPredicted RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 B3GAT2Q9NPZ5 323 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 NTMQ9P121 344 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 CRNNQ9UBG3 495 aaPredicted RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 RPS6KB2Q9UBS0 482 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ING1Q9UK53 422 aaPredicted RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 ENTPD2Q9Y5L3 495 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 FAM25AB3EWG3 89 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 FAM25CB3EWG5 89 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 FAM25GB3EWG6 89 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 MBTPS2O43462 519 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 CD1CP29017 333 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 CAPZBP47756 277 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 TMED10P49755 219 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 PRAMEF8Q5VWM4 474 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 PRAMEF7Q5VXH5 474 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 CDK20Q8IZL9 346 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 ZNF485Q8NCK3 441 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 CEP76Q8TAP6 659 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 UBASH3BQ8TF42 649 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 RFKQ969G6 155 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 PMEPA1Q969W9 287 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 RNF32Q9H0A6 362 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 NXF5Q9H1B4 397 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 ATXN7L1Q9ULK2 861 aaPredicted RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 A0A0B4J2E0 115 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 A0A1B0GX12 115 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 TMEM129A0AVI4 362 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 NKX2-2O95096 273 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 NUDT14O95848 222 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 PLGP00747 810 aaPredicted RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 THBS1P07996 1170 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 CSF3P09919 207 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 RPS4Y1P22090 263 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 HYAL4Q2M3T9 481 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 ASB18Q6ZVZ8 466 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 MEPCEQ7L2J0 689 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 IZUMO1Q8IYV9 350 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 SAMD14Q8IZD0 417 aaPredicted RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 SIX5Q8N196 739 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 LINC00471Q8N535 108 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 ACBD7Q8N6N7 88 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 SMPDL3BQ92485 455 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 PIGKQ92643 395 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 GCDHQ92947 438 aaPredicted RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 AHCYL2Q96HN2 611 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 MOGAT1Q96PD6 335 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 PDCD1LG2Q9BQ51 273 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 SRRQ9GZT4 340 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 C11orf54Q9H0W9 315 aaPredicted RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 ASB6Q9NWX5 421 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 FBXL21Q9UKT6 434 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 EXOSC1Q9Y3B2 195 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 A0A1B0GTH9 108 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 SNTNA6NMZ2 147 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 RIIAD1A6NNX1 92 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 GDF9O60383 454 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 DOK2O60496 412 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 RPP14O95059 124 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 AGR2O95994 175 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 TFP02787 698 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 ENDOUP21128 410 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 GABRA5P31644 462 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 TOMM34Q15785 309 aaPredicted RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 SLC25A35Q3KQZ1 300 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 C1QL3Q5VWW1 255 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 PAMR1Q6UXH9 720 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 LANCL3Q6ZV70 420 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms