RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PMCHL1Q16048 86 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CLLU1Q5K131 121 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 STUMQ69YW2 141 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 RNASEKQ6P5S7 137 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 VASH1Q7L8A9 365 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 C9orf40Q8IXQ3 194 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 FBXL16Q8N461 479 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 JAGN1Q8N5M9 183 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR1J2Q8NGS2 313 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 MARVELD3Q96A59 401 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCMH1Q96GD3 660 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TIMM8BQ9Y5J9 83 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM200CA6NKL6 621 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 NCBP2LA6PVI3 153 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HIDE1A8MVS5 230 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 PRAMEF26H0Y7S4 382 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 PRAMEF11O60813 436 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 DLDP09622 509 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 JMJD7P0C870 316 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 KCNE1P15382 129 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 POLR2GP62487 172 aaKnown RBP eCLIP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 GPR19Q15760 415 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SGCAQ16586 387 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CD276Q5ZPR3 534 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 GPR180Q86V85 440 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 RASGEF1CQ8N431 466 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 RNF25Q96BH1 459 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 MRTO4Q9UKD2 239 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ARL2-SNX15V9GYD0 113 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 AKAP11Q9UKA4 1901 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TRBV2A0A0J9YWF9 115 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR5K4A6NMS3 321 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HSPB2A8KAH6 182 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 EPHB6O15197 1021 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLCO2B1O94956 709 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ENPP2Q13822 863 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HSPB2Q16082 182 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SSX1Q16384 188 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 IZUMO4Q1ZYL8 232 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 C6orf136Q5SQH8 315 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM117BQ6P1L5 589 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 C6orf15Q6UXA7 325 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF695Q8IW36 515 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR13J1Q8NGT2 312 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADAMTS19Q8TE59 1207 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASB10Q8WXI3 467 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 G6PC3Q9BUM1 346 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR6C2Q9NZP2 312 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CSNK1G3Q9Y6M4 447 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 V9GYY9 64 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 USP32Q8NFA0 1604 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 RFX7Q2KHR2 1363 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 PTPN7P35236 360 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 GPM6AP51674 278 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TREML1Q86YW5 311 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR4B1Q8NGF8 309 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SFT2D1Q8WV19 159 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ATF6BQ99941 703 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 MRPL57Q9BQC6 102 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TIGARQ9NQ88 270 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 NOX1Q9Y5S8 564 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 XKRYO14609 159 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC25A27O95847 323 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TNFSF4P23510 183 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 LEG1Q6P5S2 330 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HHIPL2Q6UWX4 724 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR51A4Q8NGJ6 313 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR52E5Q8NH55 327 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 LRRC29Q8WV35 223 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 FOXRED1Q96CU9 486 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 S1PR3Q99500 378 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ELOVL4Q9GZR5 314 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SALL1Q9NSC2 1324 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 NSG1A0A0A6YYJ2 146 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 KBTBD11-OT1A0A1B0GTJ5 212 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TRBC2A0A5B9 178 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDHR4A6H8M9 788 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HNRNPH3P31942 346 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 DCTDP32321 178 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 NSG1P42857 185 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCNN1DP51172 638 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 XKP51811 444 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SMAD3P84022 425 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 DEFB115Q30KQ5 88 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC9B1Q4ZJI4 515 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CLEC6AQ6EIG7 209 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TPRG1Q6ZUI0 275 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF485Q8NCK3 441 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR5A1Q8NGJ0 315 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CACNG6Q9BXT2 260 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 RSPO3Q9BXY4 272 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ISYNA1Q9NPH2 558 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 PIN4Q9Y237 131 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SPO11Q9Y5K1 396 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ETV7Q9Y603 341 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 COLEC10Q9Y6Z7 277 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ECI2O75521 394 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 NELFEP18615 380 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 BEX3Q00994 111 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms