RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 KIAA1549Q9HCM3 1950 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 A0A0J9YW62 118 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 GJE1A6NN92 205 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 CCNA2P20248 432 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 APOBEC1P41238 236 aaKnown RBP14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 HTR3AP46098 478 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 GSK3BP49841 420 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 POLR2HP52434 150 aaKnown RBP14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 DLX5P56178 289 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 CTU2Q2VPK5 515 aaKnown RBP14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 PDSS1Q5T2R2 415 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 RIPPLY2Q5TAB7 128 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 HBMQ6B0K9 141 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 WBP2NLQ6ICG8 309 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 P4HA3Q7Z4N8 544 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 C9orf106Q8NAJ2 232 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 OR10D3Q8NH80 312 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 OR2V1Q8NHB1 315 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 ALG2Q9H553 416 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 SPAG4Q9NPE6 437 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 ADA2Q9NZK5 511 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 ABCD2Q9UBJ2 740 aa14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 SPIN1Q9Y657 262 aaPredicted RBP14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 UTP20O75691 2785 aaKnown RBP14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 DIDO1Q9BTC0 2240 aaKnown RBP14.29□□□□□ -0.12
CCDC28A-201ENST00000332797 COL12A1Q99715 3063 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 ARHGAP21Q5T5U3 1957 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 A0A0G2JNJ9 132 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 A1L4Q6 167 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 MBD3L4A6NDZ8 208 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 MBD3L3A6NE82 208 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 MBD3L5A6NJ08 208 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 SLC22A20A6NK97 555 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 GSTA4O15217 222 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 CXCL13O43927 109 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 TOXO94900 526 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 IL2RAP01589 272 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 CD247P20963 164 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 TACR3P29371 465 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 SLC7A1P30825 629 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 RGS8P57771 180 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 NCALDP61601 193 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 SLC25A3Q00325 362 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 PON3Q15166 354 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 DUSP7Q16829 419 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 LRRC23Q53EV4 343 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 XKRXQ6PP77 449 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 LSRQ86X29 649 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 GPR32P1Q8NGA4 272 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 MBD3L2Q8NHZ7 208 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 NSL1Q96IY1 281 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 UCN2Q96RP3 112 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 TM9SF2Q99805 663 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 KCTD14Q9BQ13 255 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 TMEM181Q9P2C4 612 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 Q9UFV3 132 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 CHRNA9Q9UGM1 479 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 OSGIN1Q9UJX0 560 aa14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 NCOA6Q14686 2063 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-201ENST00000332797 DOPEY1Q5JWR5 2465 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 TMED7-TICAM2A0A0A6YYA0 188 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 A0A1W2PNR3 127 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 M0R3H8 397 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 ADAMDEC1O15204 470 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 TGM6O95932 706 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 TFPIP10646 304 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 CHRNB4P30926 498 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 TIMP3P35625 211 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 KCNJ5P48544 419 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 MNAT1P51948 309 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 ZNF136P52737 540 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 CRYBA2P53672 197 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 CDSNQ15517 529 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 C16orf89Q6UX73 402 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 ADGRG3Q86Y34 549 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 PGAM4Q8N0Y7 254 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 NAXEQ8NCW5 288 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 FNDC9Q8TBE3 224 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 CA5BP1Q8WTZ4 195 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 SLC25A43Q8WUT9 341 aaPredicted RBP14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 RASSF5Q8WWW0 418 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 ASB5Q8WWX0 329 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 FIG4Q92562 907 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 OSTF1Q92882 214 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 WNT2BQ93097 391 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 OR5B2Q96R09 309 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 ARHGDIGQ99819 225 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 WFDC6Q9BQY6 131 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 PAQR5Q9NXK6 330 aaPredicted RBP14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 RPS6KB2Q9UBS0 482 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 TMED7Q9Y3B3 224 aa14.27□□□□□ -0.12
CCDC28A-201ENST00000332797 TMEM72A0PK05 275 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 HSPB2A8KAH6 182 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 SYT5O00445 386 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 CXCR6O00574 342 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 SYNGR4O95473 234 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 LGI1O95970 557 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 IFNA14P01570 189 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 AGAP20933 346 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 CXCR1P25024 350 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms