RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CENPVL1A0A0U1RR11 272 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 CTDSPLO15194 276 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 TGM5O43548 720 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 LPLP06858 475 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 NFYAP23511 347 aaPredicted RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 ATP5A1P25705 553 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 CERS1P27544 350 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 UBE2NLQ5JXB2 153 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 APOOLQ6UXV4 268 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 ZNF836Q6ZNA1 936 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 FRRS1Q6ZNA5 592 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 SERPINA12Q8IW75 414 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 SLC39A11Q8N1S5 342 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 TEX19Q8NA77 164 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 SLC16A11Q8NCK7 471 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 OR52H1Q8NGJ2 320 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 OR13C2Q8NGS9 318 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 CDS1Q92903 461 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 SLC35A4Q96G79 324 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 OR14A2Q96R54 314 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 PCBD2Q9H0N5 130 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 C6orf106Q9H6K1 298 aaPredicted RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 PFDN2Q9UHV9 154 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 ST6GALNAC2Q9UJ37 374 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 BAIAP2Q9UQB8 552 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 IGKV1-8A0A0C4DH67 115 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 TCRBV16S1A1N1A0A5B0 115 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 KHDRBS3O75525 346 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 ARL6IP5O75915 188 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 ATP1B1P05026 303 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 ANXA7P20073 488 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 HIST1H1TP22492 207 aaPredicted RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 MPIP34949 423 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 GDI2P50395 445 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 CRMP1Q14194 572 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 HES5Q5TA89 166 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 ORAI1Q96D31 301 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 PRSS27Q9BQR3 290 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 MENTQ9BUN1 341 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 ACTRT3Q9BYD9 372 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 XKR8Q9H6D3 395 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 CACYBPQ9HB71 228 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 NANSQ9NR45 359 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 ZNF275Q9NSD4 429 aaPredicted RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 KLK11Q9UBX7 282 aa13.37□□□□□ -0.27
SNX20-202ENST00000330943 PCDHGA9Q9Y5G4 932 aaKnown RBP13.37□□□□□ -0.27
SNX20-202ENST00000330943 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 H3BUI4 141 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 GKN3PP0CG01 181 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 NT5EP21589 574 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 NHLRC1Q6VVB1 395 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 OVCH2Q7RTZ1 564 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 FAM71CQ8NEG0 241 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 ARSGQ96EG1 525 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 LRIG1Q96JA1 1093 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 LCORQ96JN0 433 aaPredicted RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 NOX3Q9HBY0 568 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 ING1Q9UK53 422 aaPredicted RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 WDR45Q9Y484 360 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 TRAV27A0A087WT01 109 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 RIIAD1A6NNX1 92 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 MCRIP1C9JLW8 97 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 VEGFDO43915 354 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 SERPINA3P01011 423 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 RPN2P04844 631 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 ASGR2P07307 311 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 GIPP09681 153 aaPredicted RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 F3P13726 295 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 BCL6P41182 706 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 DHODHQ02127 395 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 GLDNQ6ZMI3 551 aaPredicted RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 TTYH1Q9H313 450 aaPredicted RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 CA5BQ9Y2D0 317 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 WNT6Q9Y6F9 365 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 CCL16O15467 120 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 ARPC5O15511 151 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 TPMTP51580 245 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 ZNF136P52737 540 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 RIPPLY1Q0D2K3 151 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 FAM111BQ6SJ93 734 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 STPG2Q8N412 459 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 ARL14Q8N4G2 192 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 OR51A7Q8NH64 312 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 MS4A6EQ96DS6 147 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 DPYSL5Q9BPU6 564 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 CCDC86Q9H6F5 360 aaKnown RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 AKAP7Q9P0M2 348 aaPredicted RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 ZNF223Q9UK11 482 aaPredicted RBP13.36□□□□□ -0.27
SNX20-202ENST00000330943 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
SNX20-202ENST00000330943 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
SNX20-202ENST00000330943 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.35□□□□□ -0.27
SNX20-202ENST00000330943 PCP4L1A6NKN8 68 aa13.35□□□□□ -0.27
SNX20-202ENST00000330943 SUSD5O60279 629 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms