RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PDSS1Q5T2R2 415 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 FAHD2BQ6P2I3 314 aaPredicted RBP12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 AGR3Q8TD06 166 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF675Q8TD23 568 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 DUSP19Q8WTR2 217 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 OSTF1Q92882 214 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 CNRIP1Q96F85 164 aaPredicted RBP12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 FAHD2AQ96GK7 314 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 LRRC37BQ96QE4 947 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 RTN4RQ9BZR6 473 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 LPAR2Q9HBW0 351 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 TNFRSF12AQ9NP84 129 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 TAS2R7Q9NYW3 318 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 VDAC3Q9Y277 283 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 PCDHB14Q9Y5E9 798 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 SLC25A15Q9Y619 301 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 NDUFB5O43674 189 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 FADS1O60427 444 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 PNPP00491 289 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 YES1P07947 543 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 RPL3P39023 403 aaKnown RBP12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 RAC1P63000 192 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 RPL38P63173 70 aaKnown RBP12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 DUSP2Q05923 314 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 GALNTL6Q49A17 601 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 TNFAIP8L3Q5GJ75 292 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 FAM71E1Q6IPT2 247 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 ANKRD42Q8N9B4 389 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 ZFP28Q8NHY6 868 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF681Q96N22 645 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 TMEM185BQ9H7F4 350 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 NTN4Q9HB63 628 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 ACSS1Q9NUB1 689 aaPredicted RBP12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 CCL27Q9Y4X3 112 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 BIRC6Q9NR09 4857 aa12.88□□□□□ -0.35
CTHRC1-201ENST00000330295 A0A1W2PR80 420 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 PIP5K1BO14986 540 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 COQ9O75208 318 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 RAD51DO75771 328 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 AVPP01185 164 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 HPCAL1P37235 193 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 NCBP2P52298 156 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 CARD18P57730 90 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 ABCE1P61221 599 aaKnown RBP12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 MAD2L1Q13257 205 aaPredicted RBP12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 STX3Q13277 289 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 RIN1Q13671 783 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 FAM219BQ5XKK7 198 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF433Q8N7K0 673 aaPredicted RBP12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 PPCDCQ96CD2 204 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 TUBGCP3Q96CW5 907 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 PRPF18Q99633 342 aaKnown RBP12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 C1QTNF5Q9BXJ0 243 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 RAB1BQ9H0U4 201 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 TAS2R9Q9NYW1 312 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 PDP1Q9P0J1 537 aaPredicted RBP12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 ABCG2Q9UNQ0 655 aa12.87□□□□□ -0.35
CTHRC1-201ENST00000330295 MYO1GB0I1T2 1018 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 TMEM233B4DJY2 109 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 LSM1O15116 133 aaKnown RBP12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 GMFGO60234 142 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 PLOD3O60568 738 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 PEX11AO75192 247 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 PDE5AO76074 875 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 PRKD3O94806 890 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 IL33O95760 270 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 IFNGR1P15260 489 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 PCSK2P16519 638 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 EDNRAP25101 427 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 GPC1P35052 558 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 SLC1A6P48664 564 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 KHKP50053 298 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 SLC18A1P54219 525 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 MAGOHP61326 146 aaKnown RBP12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 CASP8Q14790 479 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 KIAA0040Q15053 153 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 LTB4RQ15722 352 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 UGT3A2Q3SY77 523 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 NPSR1Q6W5P4 371 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 Q6ZPA2 131 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 FCRLAQ7L513 359 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 C1QL2Q7Z5L3 287 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF786Q8N393 782 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 GTPBP8Q8N3Z3 284 aaPredicted RBP12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 FNDC5Q8NAU1 212 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 OR9A2Q8NGT5 310 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 OR6Y1Q8NGX8 325 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 OR51F2Q8NH61 342 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF764Q96H86 408 aaPredicted RBP12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 CCT8L2Q96SF2 557 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 NPAS1Q99742 590 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms