RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RNLSQ5VYX0 342 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 OTPQ5XKR4 325 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ARMC6Q6NXE6 501 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 METAP1DQ6UB28 335 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ABHD13Q7L211 337 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 PLCZ1Q86YW0 608 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 SAMD14Q8IZD0 417 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ARIH2OSQ8N7S6 290 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 CAMKVQ8NCB2 501 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 RBM18Q96H35 190 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 PEX11GQ96HA9 241 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 HYLS1Q96M11 299 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 OR6C2Q9NZP2 312 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 HCN3Q9P1Z3 774 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 DAPP1Q9UN19 280 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 A0A1B0GWA3 101 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 H0YGG7 62 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 PTHLHP12272 177 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ANXA3P12429 323 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ARF3P61204 181 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 POU4F3Q15319 338 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 SSX6Q7RTT6 188 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 GPALPP1Q8IXQ4 340 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 OR52R1Q8NGF1 315 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 PTP4A1Q93096 173 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 OR10A4Q9H209 315 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 OR51J1Q9H342 316 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 AUNIPQ9H7T9 357 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 FOLH1BQ9HBA9 442 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ISYNA1Q9NPH2 558 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ACOXLQ9NUZ1 547 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 MED17Q9NVC6 651 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 MRPL39Q9NYK5 338 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 PPIEQ9UNP9 301 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 SLC35A3Q9Y2D2 325 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 HEBP2Q9Y5Z4 205 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 CFL1P23528 166 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 HTRA4P83105 476 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF267Q14586 743 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 PON3Q15166 354 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 SLC25A25Q6KCM7 469 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 RTL4Q6ZR62 310 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 OR4N2Q8NGD1 307 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 C1orf216Q8TAB5 229 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 SLC22A18Q96BI1 424 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 CD93Q9NPY3 652 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 CDV3Q9UKY7 258 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 TPD52L2O43399 206 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 NID1P14543 1247 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 DNASE1P24855 282 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 SLC6A6P31641 620 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 GALEQ14376 348 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 PYHIN1Q6K0P9 492 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF655Q8N720 491 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 OR2T35Q8NGX2 323 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 LGALS14Q8TCE9 139 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 GIMAP5Q96F15 307 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 RNF170Q96K19 258 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 DERL3Q96Q80 235 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 PIGUQ9H490 435 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 PLXNA2O75051 1894 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 OBSL1O75147 1896 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 TCRBP04435 133 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 H2AFB2P0C5Z0 115 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 LINC00271P0C7V0 271 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 UGT2B7P16662 529 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF136P52737 540 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 RAB14P61106 215 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 ILF3Q12906 894 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 GPR18Q14330 331 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 GAB4Q2WGN9 574 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 HSD17B12Q53GQ0 312 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 FAAP20Q6NZ36 180 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 FBXO42Q6P3S6 717 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 C7orf61Q8IZ16 206 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 CDRT4Q8N9R6 151 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 CREB3L1Q96BA8 519 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 NMNAT3Q96T66 252 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 MARVELD1Q9BSK0 173 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 PLA2G2FQ9BZM2 168 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 IL21RQ9HBE5 538 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 POLMQ9NP87 494 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 MRPS18AQ9NVS2 196 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 ACTR10Q9NZ32 417 aa11.92□□□□□ -0.5
HMGCS1-201ENST00000325110 SMAD9O15198 467 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 OR3A3P47888 321 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ERVK-25P63136 954 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 FAM109BQ6ICB4 259 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CD200R1LQ6Q8B3 271 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 TCTE3Q8IZS6 198 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 FAM181AQ8N9Y4 354 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 OR9A4Q8NGU2 314 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 RPLP0P6Q8NHW5 317 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 GIMAP1Q8WWP7 306 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 SERINC2Q96SA4 455 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ZFYVE21Q9BQ24 234 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ANKRD19PQ9H560 264 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CMC2Q9NRP2 79 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CYSLTR2Q9NS75 346 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms