RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 THAP7Q9BT49 309 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 ADGRL4Q9HBW9 690 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 LYRM4Q9HD34 91 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 WSB2Q9NYS7 404 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 TRAV6A0A075B6T7 132 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 PSMD9O00233 223 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 SLC19A2O60779 497 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 APBB3O95704 486 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 CBX7O95931 251 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 F8A1P23610 371 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 MLLT3P42568 568 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 ZNF85Q03923 595 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 HYAL1Q12794 435 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 ACSM3Q53FZ2 586 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 HBMQ6B0K9 141 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 METAP1DQ6UB28 335 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 GPR135Q8IZ08 494 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 METTL27Q8N6F8 245 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 LILRB4Q8NHJ6 448 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 SLC37A2Q8TED4 501 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 RSC1A1Q92681 617 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 ANKRD9Q96BM1 317 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 RNF170Q96K19 258 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 ZFP3Q96NJ6 502 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 ADAM18Q9Y3Q7 739 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 A0A0A6YYC8 382 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 I3L1I5 382 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 IMPA2O14732 288 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 TFPIP10646 304 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 AGFG1P52594 562 aaKnown RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 FAM53BQ14153 422 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 SF3A2Q15428 464 aaKnown RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 FAAH2Q6GMR7 532 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 ZNF655Q8N720 491 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 OR5M3Q8NGP4 307 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 RPLP0P6Q8NHW5 317 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 ABCG5Q9H222 651 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 RPRD1BQ9NQG5 326 aaKnown RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 DTX4Q9Y2E6 619 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 SLC9B1P1A6NJY1 282 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 IGKV1D-16P01601 117 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 HK1P19367 917 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 PGDP52209 483 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 MAT1AQ00266 395 aaKnown RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 GPR176Q14439 515 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 ESPNLQ6ZVH7 1005 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 VASH1Q7L8A9 365 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 PARGQ86W56 976 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 TRMT10AQ8TBZ6 339 aaKnown RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 ORAI1Q96D31 301 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 SPACA7Q96KW9 195 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 STACQ99469 402 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 GAS2L1Q99501 681 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-201ENST00000320755 ZNF559Q9BR84 538 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 SATB2Q9UPW6 733 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 LAMA1P25391 3075 aa16.06■□□□□ 0.16
COL9A1-201ENST00000320755 A0A087WV62 115 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 TCRBV21S2A2A0A5A6 115 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 ST6GAL1P15907 406 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 RPL4P36578 427 aaKnown RBP16.05■□□□□ 0.16
COL9A1-201ENST00000320755 PSG6Q00889 435 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 RTL4Q6ZR62 310 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 RBM18Q96H35 190 aaKnown RBP16.05■□□□□ 0.16
COL9A1-201ENST00000320755 ABHD1Q96SE0 405 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 ERVMER34-1Q9H9K5 563 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 TMEM5Q9Y2B1 443 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 IER3IP1Q9Y5U9 82 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 FAM171A2A8MVW0 826 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 ORC5O43913 435 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 TRAPPC2P0DI81 140 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 TRAPPC2BP0DI82 140 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 ARSBP15848 533 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 HIST1H1CP16403 213 aaKnown RBP16.05■□□□□ 0.16
COL9A1-201ENST00000320755 STX4Q12846 297 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 EFR3AQ14156 821 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 ZNF267Q14586 743 aaPredicted RBP16.05■□□□□ 0.16
COL9A1-201ENST00000320755 GATSQ8NAP1 163 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 OR5H6Q8NGV6 325 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 HEATR5AQ86XA9 2040 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 TICRRQ7Z2Z1 1910 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 A0A0B4J2E0 115 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 A0A1B0GX12 115 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 PTP4A3O75365 173 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 HLA-DQB1P01920 261 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 PEPDP12955 493 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 HLA-DMAP28067 261 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 GRPRP30550 384 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 AVL9Q8NBF6 648 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 DUSP18Q8NEJ0 188 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 RFT1Q96AA3 541 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 FAM131CQ96AQ9 280 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 CLIP3Q96DZ5 547 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 KCNJ15Q99712 375 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 MCCC2Q9HCC0 563 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 CYSLTR2Q9NS75 346 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 RPS6KB2Q9UBS0 482 aa16.05■□□□□ 0.16
COL9A1-201ENST00000320755 AKR7A2O43488 359 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 CD3GP09693 182 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 SNRPBP14678 240 aaKnown RBP16.04■□□□□ 0.16
COL9A1-201ENST00000320755 CFL1P23528 166 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms