RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SUN3Q8TAQ9 357 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 DUSP19Q8WTR2 217 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 TIFAQ96CG3 184 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 TMEM168Q9H0V1 697 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 GPR160Q9UJ42 338 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 SCP2D1Q9UJQ7 156 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
PABPC1-201ENST00000318607 BLOC1S5-TXNDC5H3BN57 136 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 SGK494L7N484 410 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 KCNJ13O60928 360 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 AIFM1O95831 613 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 NFYAP23511 347 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-201ENST00000318607 RPS15P62841 145 aaKnown RBP13.17□□□□□ -0.3
PABPC1-201ENST00000318607 PRR5P85299 388 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 FUT5Q11128 374 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 NDUFA9Q16795 377 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 PRRT3Q5FWE3 981 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 AADACL4Q5VUY2 407 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 CPXM2Q8N436 756 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 KIAA1143Q96AT1 154 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-201ENST00000318607 TRIM43Q96BQ3 446 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-201ENST00000318607 SCMH1Q96GD3 660 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 OR2M2Q96R28 347 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 TEAD3Q99594 435 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 MS4A8Q9BY19 250 aa13.17□□□□□ -0.3
PABPC1-201ENST00000318607 SRA1Q9HD15 236 aaKnown RBP13.17□□□□□ -0.3
PABPC1-201ENST00000318607 SIDT1Q9NXL6 827 aaKnown RBP13.17□□□□□ -0.3
PABPC1-201ENST00000318607 TVP23AA6NH52 213 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 FAM74A7A6NL05 159 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 DPM1O60762 260 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 DNAJB6O75190 326 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PPM1BO75688 479 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 ATG12O94817 140 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 ASGR2P07307 311 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 AK4P27144 223 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 GAS1P54826 345 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 TAF13Q15543 124 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 FAM74A3Q4VXF1 159 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 HSD17B12Q53GQ0 312 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 B3GNTL1Q67FW5 361 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 ZNF511Q8NB15 262 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 IRF7Q92985 503 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 FCRL1Q96LA6 429 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PTDSS2Q9BVG9 487 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 EMC7Q9NPA0 242 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PLEKHA6Q9Y2H5 1048 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 FOXE1O00358 373 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 CPMP14384 443 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PSMB1P20618 241 aaKnown RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 VIPR2P41587 438 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 ZNF805Q5CZA5 627 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 LRFN4Q6PJG9 635 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 CAMKMTQ7Z624 323 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PARGQ86W56 976 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 OR51Q1Q8NH59 317 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 APOBEC4Q8WW27 367 aaKnown RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 ACOT11Q8WXI4 607 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 HSPA12BQ96MM6 686 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 IL21Q9HBE4 155 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 STARD5Q9NSY2 213 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 LHX6Q9UPM6 363 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 TBC1D3BA6NDS4 549 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 IGLON5A6NGN9 336 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 SELENOFO60613 162 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 IL32P24001 234 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 TRMT12Q53H54 448 aaKnown RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 ZNF620Q6ZNG0 422 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 MEPCEQ7L2J0 689 aaKnown RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 SLITRK4Q8IW52 837 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 OR56B4Q8NH76 319 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 SYNPRQ8TBG9 265 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PTP4A1Q93096 173 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 CHFRQ96EP1 664 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 SLC38A1Q9H2H9 487 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 FGF20Q9NP95 211 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-201ENST00000318607 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 PLXNA4Q9HCM2 1894 aa13.16□□□□□ -0.3
PABPC1-201ENST00000318607 VWA8A3KMH1 1905 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 TEX51A0A1B0GUA7 166 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 STMND1H3BQB6 276 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 SLC31A1O15431 190 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 RP2O75695 350 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 PSMA3P25788 255 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 HTR1FP30939 366 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 SNRPNP63162 240 aaKnown RBP13.15□□□□□ -0.3
PABPC1-201ENST00000318607 MAPK14Q16539 360 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 C2orf68Q2NKX9 166 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 PCGF3Q3KNV8 242 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 CD276Q5ZPR3 534 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 ZNF783Q6ZMS7 281 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms