RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMEM81Q6P7N7 255 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 PFN4Q8NHR9 129 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 C9orf43Q8TAL5 461 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 SCMH1Q96GD3 660 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 ALPK1Q96QP1 1244 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 TRIM2Q9C040 744 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 CBR3O75828 277 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 WISP2O76076 250 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 IFNA8P32881 189 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC1A3P43003 542 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 PPIAP62937 165 aaKnown RBP13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 ST3GAL2Q16842 350 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 PODNL1Q6PEZ8 512 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 ZNF730Q6ZMV8 503 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 EPHX4Q8IUS5 362 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 OFCC1Q8IZS5 231 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 LSMEM1Q8N8F7 131 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 FAM83FQ8NEG4 500 aaPredicted RBP13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 SNRNP27Q8WVK2 155 aaKnown RBP13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 OIT3Q8WWZ8 545 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 EME1Q96AY2 570 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 CENPNQ96H22 339 aaPredicted RBP13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 OR11A1Q9GZK7 315 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 DEFB127Q9H1M4 99 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 ZNF703Q9H7S9 590 aaPredicted RBP13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 PDP1Q9P0J1 537 aaPredicted RBP13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC6A5Q9Y345 797 aa13.96□□□□□ -0.18
PDLIM5-202ENST00000318007 ELOA3DA6NLF2 546 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 LRRN3E7EW58 273 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 OR10H3O60404 316 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 ENDOUP21128 410 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 SFTPDP35247 375 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 ZSWIM7Q19AV6 140 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 ELOA3BQ3SY89 546 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 PLEKHN1Q494U1 663 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 DCST1Q5T197 706 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 ULK3Q6PHR2 472 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 STK32CQ86UX6 486 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 TMEM251Q8N6I4 163 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 ELOA3Q8NG57 546 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 PRSS27Q9BQR3 290 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 PRORYQ9H606 182 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 ACAD8Q9UKU7 415 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 B3GNT3Q9Y2A9 372 aa13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 TLN1Q9Y490 2541 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-202ENST00000318007 A0A087WUU8 490 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 ZC3H12DA2A288 527 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 FAM47E-STBD1D6RA91 191 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 G3V2T6 193 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 CHP2O43745 196 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 OR5F1O95221 314 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 FUT1P19526 365 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 CXCR1P25024 350 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 UGT2B15P54855 530 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 DSCR4P56555 118 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 C19orf57Q0VDD7 668 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC6A19Q695T7 634 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 ZNF613Q6PF04 617 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 IGFL3Q6UXB1 125 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 NRMQ8IXM6 262 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 UBQLNLQ8IYU4 475 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 GALNT4Q8N4A0 578 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 POC1BQ8TC44 478 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 POP5Q969H6 163 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 GTPBP3Q969Y2 492 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 SLC6A15Q9H2J7 730 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 SMURF2Q9HAU4 748 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 C20orf141Q9NUB4 165 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 LIPGQ9Y5X9 500 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 IGLV3-32A0A0A0MS00 114 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 H0YC42 278 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 SOCS2O14508 198 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 TFECO14948 347 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 FMO6PO60774 539 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 RASAL1O95294 804 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 ZNF24P17028 368 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 MSX1P28360 303 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 GPR4P46093 362 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 TPD52P55327 224 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 ALDH6A1Q02252 535 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 RIPK1Q13546 671 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 TRAM2Q15035 370 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 C1QL3Q5VWW1 255 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 RRM2BQ7LG56 351 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 ZDHHC13Q8IUH4 622 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 EXD3Q8N9H8 876 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 PIK3C3Q8NEB9 887 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 TMEM234Q8WY98 164 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 FAM46AQ96IP4 442 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 TAAR6Q96RI8 345 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 UBQLN3Q9H347 655 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 C6orf203Q9P0P8 240 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 B4GALT7Q9UBV7 327 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 TMCC3Q9ULS5 477 aa13.94□□□□□ -0.18
PDLIM5-202ENST00000318007 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms