RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SCGB2B2Q4G0G5 96 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF770Q6IQ21 691 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 Q6ZNB5 142 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ABHD13Q7L211 337 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM200AQ86VY9 491 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 DCAF4L2Q8NA75 395 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 MYLIPQ8WY64 445 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 IGSF8Q969P0 613 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ALG14Q96F25 216 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 LINGO1Q96FE5 620 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 LMLNQ96KR4 655 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 NOL4LQ96MY1 436 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 CNTNAP3BQ96NU0 1288 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 OR2A7Q96R45 310 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 OR4K3Q96R72 315 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 UBL7Q96S82 380 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ELF4Q99607 663 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 C20orf85Q9H1P6 137 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 FTSJ1Q9UET6 329 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ZDHHC8Q9ULC8 765 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 SLC35A3Q9Y2D2 325 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 A0A1B0GTL3 188 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ZAR1LA6NP61 321 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ADAM10O14672 748 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 OR1I1O60431 355 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 CLDN9O95484 217 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 CD160O95971 181 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 BCKDHAP12694 445 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 AMD1P17707 334 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 BMI1P35226 326 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 GDNFP39905 211 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 CDKN1BP46527 198 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 PNLIPRP2P54317 469 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 PPIAP62937 165 aaKnown RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF235Q14590 738 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 NDUFA9Q16795 377 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 C9orf64Q5T6V5 341 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF385CQ66K41 422 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 C12orf73Q69YU5 71 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM71Q6P5X7 295 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 OGFOD3Q6PK18 319 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 GDPD4Q6W3E5 623 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 SLC35F3Q8IY50 421 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 TOMM5Q8N4H5 51 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 NETO2Q8NC67 525 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 OR10D4PQ8NGN7 298 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 FAM120BQ96EK7 910 aaKnown RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 TCTN2Q96GX1 697 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 PBX4Q9BYU1 374 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 GPR62Q9BZJ7 368 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 DPY30Q9C005 99 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 NANSQ9NR45 359 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 CLN6Q9NWW5 311 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ELOVL2Q9NXB9 296 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 FLRT1Q9NZU1 646 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF282Q9UDV7 671 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 GSTK1Q9Y2Q3 226 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 YARS2Q9Y2Z4 477 aaKnown RBP6.18□□□□□ -1.42
ZNF540-201ENST00000316433 STARD10Q9Y365 291 aa6.18□□□□□ -1.42
ZNF540-201ENST00000316433 A0A0U1RQV5 110 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 EIF4E2O60573 245 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CYTIPO60759 359 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 EFCAB14O75071 495 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CYBAP13498 195 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 AKR1A1P14550 325 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 MGMTP16455 207 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 AVPR2P30518 371 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 KDELR2P33947 212 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 HSD11B2P80365 405 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 BDH1Q02338 343 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 DYRK1AQ13627 763 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ABRAXAS2Q15018 415 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ZRANB3Q5FWF4 1079 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 GRHL2Q6ISB3 625 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PSRC1Q6PGN9 363 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 TPGS1Q6ZTW0 290 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 TRMT1LQ7Z2T5 733 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 TIPARPQ7Z3E1 657 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 GLT6D1Q7Z4J2 308 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 VRK3Q8IV63 474 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ZBTB2Q8N680 514 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 OR9Q2Q8NGE9 314 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PXYLP1Q8TE99 480 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SH3RF2Q8TEC5 729 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PIH1D2Q8WWB5 315 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 WDR89Q96FK6 387 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 POLR2J3Q9H1A7 115 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 GOLGA2P5Q9HBQ8 144 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ASF1BQ9NVP2 202 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SNX10Q9Y5X0 201 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ARL5AQ9Y689 179 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 MTCL1Q9Y4B5 1905 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 A0A1W2PPQ1 181 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 OR6C76A6NM76 312 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 F5H5T6 163 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 M0QZK8 103 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CHST10O43529 356 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SMPD2O60906 423 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 VNN2O95498 520 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 F10P00742 488 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms