RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 LRRC23Q53EV4 343 aaPredicted RBP7.09□□□□□ -1.27
CDC42-201ENST00000315554 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 NHSL2Q5HYW2 709 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 C1orf185Q5T7R7 199 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 PRAMEF8Q5VWM4 474 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 PRAMEF7Q5VXH5 474 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 AP1ARQ63HQ0 302 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 RTL6Q6ICC9 239 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 AAGABQ6PD74 315 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 ENPP6Q6UWR7 440 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 RPTNQ6XPR3 784 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 ARPINQ7Z6K5 226 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 CMIPQ8IY22 773 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 ULK2Q8IYT8 1036 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 DEFB107AQ8IZN7 70 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 CADM2Q8N3J6 435 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 GTPBP8Q8N3Z3 284 aaPredicted RBP7.09□□□□□ -1.27
CDC42-201ENST00000315554 METTL25Q8N6Q8 603 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 GPR32P1Q8NGA4 272 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 VANGL1Q8TAA9 524 aaPredicted RBP7.09□□□□□ -1.27
CDC42-201ENST00000315554 SLC26A7Q8TE54 656 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 FIG4Q92562 907 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 ZBTB8AQ96BR9 441 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 REXO5Q96IC2 774 aaKnown RBP7.09□□□□□ -1.27
CDC42-201ENST00000315554 TRIB1Q96RU8 372 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 HOPXQ9BPY8 73 aaPredicted RBP7.09□□□□□ -1.27
CDC42-201ENST00000315554 TUBA1CQ9BQE3 449 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 SRA1Q9HD15 236 aaKnown RBP7.09□□□□□ -1.27
CDC42-201ENST00000315554 SLC5A6Q9Y289 635 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 MEMO1Q9Y316 297 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 MRPS18CQ9Y3D5 142 aaKnown RBP7.09□□□□□ -1.27
CDC42-201ENST00000315554 FAM215AQ9Y5M1 114 aa7.09□□□□□ -1.27
CDC42-201ENST00000315554 POLEQ07864 2286 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 FLNCQ14315 2725 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ELOVL7A1L3X0 281 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 CFAP73A6NFT4 308 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ERICH4A6NGS2 130 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 EIF1AYO14602 144 aaKnown RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 ZG16O60844 167 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 SERPINB7O75635 380 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 GP1BBP13224 206 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ZNF708P17019 499 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 CD247P20963 164 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 PTNP21246 168 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 CHMP24386 653 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 PSMA4P25789 261 aaKnown RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 ACVR2AP27037 513 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 PRKAR1BP31321 381 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ACAA2P42765 397 aaKnown RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 HTR3AP46098 478 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 CLDN15P56746 228 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 NUP107P57740 925 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 CBX1P83916 185 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ADORA2A-AS1P86434 159 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 PMPCAQ10713 525 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 DUSP7Q16829 419 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 GLYR1Q49A26 553 aaPredicted RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 ACSF3Q4G176 576 aaPredicted RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 RNF220Q5VTB9 566 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ERICH5Q6P6B1 374 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 DHRS4L2Q6PKH6 230 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 PLEKHM3Q6ZWE6 761 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 TRPM8Q7Z2W7 1104 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 PATL1Q86TB9 770 aaKnown RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 RBM45Q8IUH3 476 aaKnown RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 LACC1Q8IV20 430 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 LILRA2Q8N149 483 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 RBM15BQ8NDT2 890 aaKnown RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 DTNBP1Q96EV8 351 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 CCDC120Q96HB5 630 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ZNF845Q96IR2 970 aaPredicted RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 CDRT15Q96T59 188 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 KCTD14Q9BQ13 255 aaPredicted RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 SPATA5L1Q9BVQ7 753 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 PRDM14Q9GZV8 571 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 TP63Q9H3D4 680 aaPredicted RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 HHATLQ9HCP6 504 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 SPAG4Q9NPE6 437 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 EXOSC3Q9NQT5 275 aaKnown RBP7.08□□□□□ -1.28
CDC42-201ENST00000315554 CTPS2Q9NRF8 586 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 ACER3Q9NUN7 267 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 TMEM181Q9P2C4 612 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 SLC13A4Q9UKG4 626 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 RABL2BQ9UNT1 228 aa7.08□□□□□ -1.28
CDC42-201ENST00000315554 A0A0J9YW62 118 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 A0A1B0GUH1 482 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 A0A1W2PNR3 127 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 PRORSD1PA6NEY8 169 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 FIGNL2A6NMB9 653 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 CLCA1A8K7I4 914 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 CXCR6O00574 342 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 TNFSF11O14788 317 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 CXCL13O43927 109 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 DNAJA2O60884 412 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 WDR1O75083 606 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 NTN1O95631 604 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 CPN1P15169 458 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 ZNF17P17021 662 aa7.07□□□□□ -1.28
CDC42-201ENST00000315554 HTR2AP28223 471 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms