RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 IZUMO1Q8IYV9 350 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 STPG2Q8N412 459 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 RFLNBQ8N5W9 214 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 CYB561A3Q8NBI2 242 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 OR13C2Q8NGS9 318 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 OR56B4Q8NH76 319 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 TMEM239Q8WW34 195 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SMPDL3BQ92485 455 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 PEX11GQ96HA9 241 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 ZNF578Q96N58 590 aaPredicted RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 SARGQ9BW04 601 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 LRRN3Q9H3W5 708 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SPATA2Q9UM82 520 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SLC27A6Q9Y2P4 619 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SCN3AQ9NY46 2000 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 GYPBP06028 91 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 PROS1P07225 676 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 CXCL2P19875 107 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 NUP62P37198 522 aaPredicted RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 ERVFC1P60507 584 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SNRPNP63162 240 aaKnown RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 BAMBIQ13145 260 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 CAMK1Q14012 370 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 ZNF273Q14593 569 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 DUSP5Q16690 384 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 PIGKQ92643 395 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 TTTY10Q9BZA0 68 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 AUNIPQ9H7T9 357 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 ACSL5Q9ULC5 683 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 NPTNQ9Y639 398 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 TRPM6Q9BX84 2022 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 MAGEB4O15481 346 aaPredicted RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 LYPD3O95274 346 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ALDOBP05062 364 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SLC2A5P22732 501 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 BTN3A2P78410 334 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 OR1Q1Q15612 314 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 TCTE1Q5JU00 501 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SFRP5Q5T4F7 317 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SLC22A10Q63ZE4 541 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 DGLUCYQ7Z3D6 616 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ARSGQ96EG1 525 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 MS4A4EQ96PG1 132 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ERMAPQ96PL5 475 aaPredicted RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 SLC7A5P2Q9GIP4 190 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ABRACLQ9P1F3 81 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ST6GALNAC2Q9UJ37 374 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 POMT2Q9UKY4 750 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 CAMK2AQ9UQM7 478 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SIGLEC7Q9Y286 467 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 DNAH14Q0VDD8 3507 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 DOCK9Q9BZ29 2069 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 TRAV1-2A0A0B4J238 106 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 TCRBV16S1A1N1A0A5B0 115 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SLC22A23A1A5C7 686 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 OR52A4PA6NMU1 304 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 RNGTTO60942 597 aaKnown RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 FGF19O95750 216 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ASGR2P07307 311 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SAGP10523 405 aaPredicted RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 HCCSP53701 268 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 DUSP8Q13202 625 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 CRMP1Q14194 572 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ARHGAP11BQ3KRB8 267 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 RANBP3LQ86VV4 465 aaPredicted RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 NRROSQ86YC3 692 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 RNF113BQ8IZP6 322 aaKnown RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 OR2L3Q8NG85 312 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 OR2L8Q8NGY9 312 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SIPA1Q96FS4 1042 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 RADILQ96JH8 1075 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 C10orf90Q96M02 699 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 SDF2Q99470 211 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 C7orf50Q9BRJ6 194 aaKnown RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 ACTR6Q9GZN1 396 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 C20orf85Q9H1P6 137 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 ZCCHC4Q9H5U6 513 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 MBNL1Q9NR56 388 aaKnown RBP12.43□□□□□ -0.42
SKA3-202ENST00000314759 SPHK1Q9NYA1 384 aa12.43□□□□□ -0.42
SKA3-202ENST00000314759 TRAV27A0A087WT01 109 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 TBC1D3KA0A087X1G2 549 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 ABHD14A-ACY1A0A1B0GW23 586 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 TBC1D3BA6NDS4 549 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 TBC1D3FA6NER0 549 aaPredicted RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 GSTZ1O43708 216 aaPredicted RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 PRICKLE3O43900 615 aaPredicted RBP12.42□□□□□ -0.42
SKA3-202ENST00000314759 GMDSO60547 372 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 RCBTB2O95199 551 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 GDNFP39905 211 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 DYRK1AQ13627 763 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 ZNF234Q14588 700 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 TMEM255AQ5JRV8 349 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 TBC1D3GQ6DHY5 549 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 SEZ6L2Q6UXD5 910 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 SLAIN1Q8ND83 568 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 OR11G2Q8NGC1 345 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 OR52E1Q8NGJ3 308 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 OR51A7Q8NH64 312 aa12.42□□□□□ -0.42
SKA3-202ENST00000314759 MOSPD2Q8NHP6 518 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms