RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FZD7O75084 574 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TK1P04183 234 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF91Q05481 1191 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ARHGEF39Q8N4T4 335 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF485Q8NCK3 441 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 OR10A5Q9H207 317 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 OR10A2Q9H208 303 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ALPK3Q96L96 1907 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 C12orf71A8MTZ7 269 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TARM1B6A8C7 271 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SNAI1O95863 264 aaPredicted RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 CPN1P15169 458 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SPI1P17947 270 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ACVRL1P37023 503 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 MMP15P51511 669 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ARSKQ6UWY0 536 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 IL34Q6ZMJ4 242 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ZSCAN1Q8NBB4 408 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SIPA1Q96FS4 1042 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 OPA3Q9H6K4 179 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TNFRSF10CO14798 259 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 EIF1BO60739 113 aaKnown RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ATP1B1P05026 303 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SMIM18P0DKX4 95 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 LAMP1P11279 417 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 NAGAP17050 411 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TNFSF8P32971 234 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 CASP3P42574 277 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 GRB2P62993 217 aaKnown RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 WDR5BQ86VZ2 330 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SLC35F2Q8IXU6 374 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SPATA6Q9NWH7 488 aaPredicted RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 USF3Q68DE3 2245 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TSPAN12O95859 305 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TPBGQ13641 420 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 EIF2S3LQ2VIR3 472 aaKnown RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ATAD3CQ5T2N8 411 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 AGBL4Q5VU57 503 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 RRNAD1Q96FB5 475 aaKnown RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF583Q96ND8 569 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SLC5A7Q9GZV3 580 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 FGF20Q9NP95 211 aaPredicted RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 LTBP1Q14766 1721 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 GMDSO60547 372 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 FUCA1P04066 466 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 FURINP09958 794 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SLC1A3P43003 542 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 DEFB115Q30KQ5 88 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TMED4Q7Z7H5 227 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 CSNK1A1LQ8N752 337 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 OR51A2Q8NGJ7 313 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 NAT6Q93015 286 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 A0A0J9YY10 115 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 LINC01387J3KSC0 135 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 AGTR2P50052 363 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 HIST2H3PS2Q5TEC6 136 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 PODNL1Q6PEZ8 512 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ADGRE4PQ86SQ3 457 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SNX29P2Q8IUI4 249 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM190Q8WZ59 177 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SLC39A7Q92504 469 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 CORO2AQ92828 525 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ZC3HAV1LQ96H79 300 aaKnown RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 LINC00615Q96LM1 132 aaPredicted RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 STRADBQ9C0K7 418 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 TXNL4BQ9NX01 149 aaKnown RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF322Q6U7Q0 402 aaPredicted RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 RDH10Q8IZV5 341 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 GPR26Q8NDV2 337 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 THEM6Q8WUY1 208 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 KHSRPQ92945 711 aaKnown RBP eCLIP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 SMAD5Q99717 465 aaKnown RBP8.26□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF700Q9H0M5 742 aa8.26□□□□□ -1.09
COL6A5-202ENST00000312481 F8W036 122 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 TGM5O43548 720 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 LCN6P62502 163 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 MC2RQ01718 297 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 PLA1AQ53H76 456 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 KLBQ86Z14 1044 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 SPICQ8N5J4 248 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF419Q96HQ0 510 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ELF4Q99607 663 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 UQCC2Q9BRT2 126 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM82A0PJX8 343 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 C4orf47A7E2U8 309 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 APEHP13798 732 aaKnown RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 POLR2CP19387 275 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 SDHBP21912 280 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 SLC6A9P48067 706 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 FGFBP1Q14512 234 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 OR1J2Q8NGS2 313 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 IP6K3Q96PC2 410 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 NICN1Q9BSH3 213 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 CPSF4LA6NMK7 179 aaKnown RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 NPIPA2E9PIF3 369 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 NPIPA3F8WFD2 350 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 PEX12O00623 359 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 CYC1P08574 325 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 HBA1P69905 142 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms