RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 IFNL1Q8IU54 200 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 PDZD9Q8IXQ8 264 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 CMIPQ8IY22 773 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 HDDC3Q8N4P3 179 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 OR56A1Q8NGH5 318 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 OR10Z1Q8NGY1 313 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 SCARB1Q8WTV0 552 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 CDS1Q92903 461 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 AICDAQ9GZX7 198 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 SAGE1Q9NXZ1 904 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 GNG8Q9UK08 70 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 TRBV2A0A0J9YWF9 115 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 RIIAD1A6NNX1 92 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 HOXA2O43364 376 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 KLF4O43474 513 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 PPP1R3DO95685 299 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 TAS2R43P59537 309 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 RAP2BP61225 183 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 STX4Q12846 297 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 TRAM1Q15629 374 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 ZNF658BQ4V348 819 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-202ENST00000310645 FAM69AQ5T7M9 428 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 DMKNQ6E0U4 476 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-202ENST00000310645 C11orf88Q6PI97 169 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 WDR88Q6ZMY6 472 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 OVCH2Q7RTZ1 564 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 UBE2Q1Q7Z7E8 422 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 FCAMRQ8WWV6 532 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 NUS1Q96E22 293 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 SLC35A4Q96G79 324 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 TMEM138Q9NPI0 162 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 POT1Q9NUX5 634 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 ING1Q9UK53 422 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-202ENST00000310645 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-202ENST00000310645 MTCL1Q9Y4B5 1905 aaKnown RBP13.59□□□□□ -0.23
COL6A2-202ENST00000310645 A8MXK9 166 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.23
COL6A2-202ENST00000310645 EMC8O43402 210 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 ARL6IP5O75915 188 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 AIFM1O95831 613 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 IGF2P01344 180 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 SOD2P04179 222 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 GIPP09681 153 aaPredicted RBP13.58□□□□□ -0.23
COL6A2-202ENST00000310645 EDNRAP25101 427 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 CERS1P27544 350 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 CLVS2Q5SYC1 327 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.23
COL6A2-202ENST00000310645 LINC00518Q8N0U6 118 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 OR4C6Q8NH72 309 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 OR52A5Q9H2C5 316 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 ADGRL4Q9HBW9 690 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 GPN1Q9HCN4 374 aaPredicted RBP13.58□□□□□ -0.23
COL6A2-202ENST00000310645 KLHL9Q9P2J3 617 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 WDR45Q9Y484 360 aa13.58□□□□□ -0.23
COL6A2-202ENST00000310645 A0A0A6YYD5 115 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 TUBAL3A6NHL2 446 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 FAM74A7A6NL05 159 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 WASH3PC4AMC7 463 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 C4orf51C9J302 202 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 BHLHE40O14503 412 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 LATO43561 262 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 MTRF1O75570 445 aaKnown RBP13.58□□□□□ -0.24
COL6A2-202ENST00000310645 IFNGR1P15260 489 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 LGALS3BPQ08380 585 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 FAM74A3Q4VXF1 159 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 ACOT4Q8N9L9 421 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 SNX33Q8WV41 574 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 NOX4Q9NPH5 578 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 KRCC1Q9NPI7 259 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-202ENST00000310645 OR6C74A6NCV1 312 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 LRIT2A6NDA9 550 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 SDC3O75056 442 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF35P13682 527 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 ADH7P40394 386 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 C2orf68Q2NKX9 166 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 FAM74A1Q5RGS3 127 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 GSG1LQ6UXU4 331 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 AMZ2Q86W34 360 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 CACUL1Q86Y37 369 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 OR4N5Q8IXE1 308 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 OR6V1Q8N148 313 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 OR2L2Q8NH16 312 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 GRHL3Q8TE85 626 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 FKRPQ9H9S5 495 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 CAPN10Q9HC96 672 aa13.58□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF443Q9Y2A4 671 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-202ENST00000310645 PCDHGA9Q9Y5G4 932 aaKnown RBP13.58□□□□□ -0.24
COL6A2-202ENST00000310645 LRG1P02750 347 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 CSNK1G2P78368 415 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 SLC7A9P82251 487 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 REEP5Q00765 189 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GK2Q14410 553 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-202ENST00000310645 MLC1Q15049 377 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 RPE65Q16518 533 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 UBE2NLQ5JXB2 153 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 TMEM69Q5SWH9 247 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 BRIX1Q8TDN6 353 aaKnown RBP13.57□□□□□ -0.24
COL6A2-202ENST00000310645 ZDHHC1Q8WTX9 485 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 OTUB2Q96DC9 234 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms