RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PRSS16Q9NQE7 514 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 RLIMQ9NVW2 624 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 PISDQ9UG56 409 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 KCND3Q9UK17 655 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 CRTAPO75718 401 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 TPPPO94811 219 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 NFYAP23511 347 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 IL4RP24394 825 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 GABRB3P28472 473 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 RRAS2P62070 204 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 ACSM3Q53FZ2 586 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 IL20RBQ6UXL0 311 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 MEX3BQ6ZN04 569 aaKnown RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 NAGSQ8N159 534 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 OR52N2Q8NGI0 321 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 OR51L1Q8NGJ5 315 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 C16orf78Q8WTQ4 265 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 TSACCQ96A04 125 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 SPIN2AQ99865 258 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SPIN2BQ9BPZ2 258 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 PSD2Q9BQI7 771 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ZNF559Q9BR84 538 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 GCM1Q9NP62 436 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 UFSP2Q9NUQ7 469 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 DKKL1Q9UK85 242 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 A0A0B4J2A0 478 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 TCRBV3S1A0A5B6 114 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 IL33O95760 270 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 FDXRP22570 491 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 RAB28P51157 221 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SELENOWP63302 87 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 GALNT1Q10472 559 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 RGNQ15493 299 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 NADSYN1Q6IA69 706 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SMAP2Q8WU79 429 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 PRRT1Q99946 306 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 OCSTAMPQ9BR26 566 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 PELOQ9BRX2 385 aaKnown RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 HDAC8Q9BY41 377 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SHPKQ9UHJ6 478 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 DCDC2BA2VCK2 349 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 RAD1O60671 282 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 PEX14O75381 377 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ATG12O94817 140 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 MT-CO2P00403 227 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 FUCA1P04066 466 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 C21orf33P30042 268 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 ZNF84P51523 738 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 HMGN3Q15651 99 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 DEFB133Q30KQ1 61 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ZNF542PQ5EBM4 170 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 CREB3L2Q70SY1 520 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 DPPA4Q7L190 304 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 CD163Q86VB7 1156 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 MDGA1Q8NFP4 955 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 OR52H1Q8NGJ2 320 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ADAMTS16Q8TE57 1224 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 TMEM174Q8WUU8 243 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 GGHQ92820 318 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 FAM86C1Q9NVL1 165 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 CNIH4Q9P003 139 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 RCE1Q9Y256 329 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 CSNK1G3Q9Y6M4 447 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ZNF860A6NHJ4 632 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 DRGXA6NNA5 263 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 FAM171A2A8MVW0 826 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SLC16A5O15375 505 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SEC14L2O76054 403 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 HLA-AP01891 365 aaKnown RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 MAOBP27338 520 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ETV5P41161 510 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SLC10A2Q12908 348 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 MEF2DQ14814 521 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 GRM7Q14831 915 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SIX1Q15475 284 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 CYS1Q717R9 158 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 GPR155Q7Z3F1 870 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ZNF808Q8N4W9 903 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 CADM4Q8NFZ8 388 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 RPL3LQ92901 407 aaKnown RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 ECHDC3Q96DC8 303 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 SGCZQ96LD1 299 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 PITX2Q99697 317 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 OR8D2Q9GZM6 311 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 DNTTIP1Q9H147 329 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 DCAF13Q9NV06 445 aaKnown RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 MARCH4Q9P2E8 410 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 MYH6P13533 1939 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 SRPX2O60687 465 aaPredicted RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 STK17BO94768 372 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 IL1AP01583 271 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 MPC1LP0DKB6 136 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 LAMP1P11279 417 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 HMGA1P17096 107 aaKnown RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 ACRV1P26436 265 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 DUSP7Q16829 419 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 TSSK4Q6SA08 328 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 METAP1DQ6UB28 335 aaPredicted RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 TMEM135Q86UB9 458 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms