RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ZNF845Q96IR2 970 aaPredicted RBP17.82■□□□□ 0.44
VEGFB-201ENST00000309422 OR5B2Q96R09 309 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 SLC39A3Q9BRY0 314 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 NANOGQ9H9S0 305 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 FANCFQ9NPI8 374 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 GLRX2Q9NS18 164 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 FOXD3Q9UJU5 478 aaPredicted RBP17.82■□□□□ 0.44
VEGFB-201ENST00000309422 NKX2-6A6NCS4 301 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 H0YC42 278 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 AIM2O14862 343 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 NTN1O95631 604 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 IFNA14P01570 189 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 CD1EP15812 388 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 CXCR1P25024 350 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 PCGF2P35227 344 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 NUDT2P50583 147 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 ZNF136P52737 540 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 TPD52P55327 224 aaPredicted RBP17.81■□□□□ 0.44
VEGFB-201ENST00000309422 SYT14P1Q58G82 188 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 GKAP1Q5VSY0 366 aaPredicted RBP17.81■□□□□ 0.44
VEGFB-201ENST00000309422 RANBP3LQ86VV4 465 aaPredicted RBP17.81■□□□□ 0.44
VEGFB-201ENST00000309422 LRRC37BQ96QE4 947 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 UCK2Q9BZX2 261 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 RLIMQ9NVW2 624 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 PACSIN3Q9UKS6 424 aa17.81■□□□□ 0.44
VEGFB-201ENST00000309422 AP3D1O14617 1153 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 TOXO94900 526 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 TGM6O95932 706 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 UQCRC1P31930 480 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 CLK1P49759 484 aaKnown RBP17.8■□□□□ 0.44
VEGFB-201ENST00000309422 RGS8P57771 180 aaPredicted RBP17.8■□□□□ 0.44
VEGFB-201ENST00000309422 GTF3C1Q12789 2109 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 SELPLGQ14242 412 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 RNPS1Q15287 305 aaKnown RBP17.8■□□□□ 0.44
VEGFB-201ENST00000309422 SP5Q6BEB4 398 aaPredicted RBP17.8■□□□□ 0.44
VEGFB-201ENST00000309422 DHRS4L2Q6PKH6 230 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 NAXEQ8NCW5 288 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 FIG4Q92562 907 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 OSTF1Q92882 214 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 HOPXQ9BPY8 73 aaPredicted RBP17.8■□□□□ 0.44
VEGFB-201ENST00000309422 CCDC106Q9BWC9 280 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 TRIM8Q9BZR9 551 aa17.8■□□□□ 0.44
VEGFB-201ENST00000309422 DIDO1Q9BTC0 2240 aaKnown RBP17.8■□□□□ 0.44
VEGFB-201ENST00000309422 TMED7-TICAM2A0A0A6YYA0 188 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 A0A0J9YW62 118 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 BCAS1O75363 584 aaPredicted RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 SMNDC1O75940 238 aaKnown RBP eCLIP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 GKN3PP0CG01 181 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 TACR3P29371 465 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 PRDX6P30041 224 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 VMACQ2NL98 169 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 NET1Q7Z628 596 aaPredicted RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 KIF18BQ86Y91 864 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 SLC43A2Q8N370 569 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 ANKS4BQ8N8V4 417 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 GMPPAQ96IJ6 420 aaPredicted RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 ADGRG7Q96K78 797 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 NPAS1Q99742 590 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 TACO1Q9BSH4 297 aaKnown RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 RNF122Q9H9V4 155 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 CTPS2Q9NRF8 586 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 TESQ9UGI8 421 aaKnown RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 TMED7Q9Y3B3 224 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 HDGFL3Q9Y3E1 203 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 DOPEY2Q9Y3R5 2298 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 MYO7BQ6PIF6 2116 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 A0A1W2PNV4 684 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 KDM4EB2RXH2 506 aaPredicted RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 SULT2B1O00204 365 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 CCNA2P20248 432 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 IL11P20809 199 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 ENPP1P22413 925 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 CPOXP36551 454 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 DLX5P56178 289 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 RAC3P60763 192 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 SIRPAP78324 504 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 ZNF239Q16600 458 aaKnown RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 CTU2Q2VPK5 515 aaKnown RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 RABL3Q5HYI8 236 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 TMEM201Q5SNT2 666 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 MEX3BQ6ZN04 569 aaKnown RBP17.79■□□□□ 0.44
VEGFB-201ENST00000309422 STK32CQ86UX6 486 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 ZZZ3Q8IYH5 903 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 OR2T12Q8NG77 320 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 KLHDC3Q9BQ90 382 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 PIF1Q9H611 641 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 KLHL9Q9P2J3 617 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 PROCRQ9UNN8 238 aa17.79■□□□□ 0.44
VEGFB-201ENST00000309422 FAM220BPB1ANY3 271 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 FXYD1O00168 92 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 ZNF208O43345 1280 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 COL8A1P27658 744 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 GTF2E2P29084 291 aaKnown RBP17.78■□□□□ 0.44
VEGFB-201ENST00000309422 ADRM1Q16186 407 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 FCRLAQ7L513 359 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 PTOV1Q86YD1 416 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 C10orf111Q8N326 155 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 CLIP4Q8N3C7 705 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 OR52E4Q8NGH9 312 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 RNF217Q8TC41 542 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms