RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SKP2Q13309 424 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 ARMCX4Q5H9R4 360 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 DCAF12Q5T6F0 453 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 RTL4Q6ZR62 310 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF367Q7RTV3 350 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 TP53INP1Q96A56 240 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 C3orf49Q96BT1 292 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 DOK1Q99704 481 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 MESP1Q9BRJ9 268 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 LAT2Q9GZY6 243 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 EXOSC3Q9NQT5 275 aaKnown RBP13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 A0A087WUJ7 227 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 RIIAD1A6NNX1 92 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 PGCP20142 388 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 EFR3AQ14156 821 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 TNFRSF13CQ96RJ3 184 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 SIGLEC11Q96RL6 698 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 CDCA4Q9BXL8 241 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 DEFB126Q9BYW3 111 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 MYO15AQ9UKN7 3530 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
SHCBP1-201ENST00000303383 MUC3AQ02505 3323 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 OIP5O43482 229 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 RFPL3O75679 317 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 ZFAND5O76080 213 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 APOL3O95236 402 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 JMJD7P0C870 316 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC9A3P48764 834 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 C16orf47Q6ZP98 133 aaPredicted RBP13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 CXXC5Q7LFL8 322 aaKnown RBP13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 TMCO6Q96DC7 493 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 MND1Q9BWT6 205 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC26A1Q9H2B4 701 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 CXCR1P25024 350 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 EVI2BP34910 448 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 NFATC3Q12968 1075 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 BTBD16Q32M84 506 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 KLHL12Q53G59 568 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC25A30Q5SVS4 291 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 CPOQ8IVL8 374 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 BMPERQ8N8U9 685 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 GALNT6Q8NCL4 622 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 APCDD1LQ8NCL9 501 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 WDR54Q9H977 334 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 GPN2Q9H9Y4 310 aaPredicted RBP13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 LOXL2Q9Y4K0 774 aa13.28□□□□□ -0.28
SHCBP1-201ENST00000303383 ALG1L2C9J202 215 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 EIF4E2O60573 245 aaKnown RBP13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC25A12O75746 678 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 IFNGP01579 166 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 GP1BBP13224 206 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF182P17025 639 aaPredicted RBP13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 GRK5P34947 590 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC15A1P46059 708 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 TMED10P49755 219 aaKnown RBP13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF117Q03924 483 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 FAM71CQ8NEG0 241 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 OR9Q1Q8NGQ5 310 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 OR6C70A6NIJ9 312 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 FAM183AA6NL82 134 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 ATP6V1G1O75348 118 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC2A10O95528 541 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 PPP1R3DO95685 299 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 SLC26A5P58743 744 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 FNDC7Q5VTL7 733 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 FAM69BQ5VUD6 431 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 MRPL14Q6P1L8 145 aaKnown RBP13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 MRGPREQ86SM8 312 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 NAXDQ8IW45 347 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 NUBPLQ8TB37 319 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 CCNL2Q96S94 520 aaPredicted RBP13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 MGLLQ99685 303 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 EDEM2Q9BV94 578 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 SEMA4CQ9C0C4 833 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 BAIAP2Q9UQB8 552 aa13.27□□□□□ -0.28
SHCBP1-201ENST00000303383 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 A0A1W2PQD3 144 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC22A1O15245 554 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 AIREO43918 545 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 NDUFB2O95178 105 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 ONECUT2O95948 504 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 NGFRP08138 427 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 ZNF3P17036 446 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC1A3P43003 542 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 RAB40BQ12829 278 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 CBFBQ13951 182 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 PLBD1Q6P4A8 553 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 GID4Q8IVV7 300 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 PMEPA1Q969W9 287 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 CENPOQ9BU64 300 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 ZNF426Q9BUY5 554 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 PISDQ9UG56 409 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 KIF26BQ2KJY2 2108 aa13.27□□□□□ -0.29
SHCBP1-201ENST00000303383 HK1P19367 917 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 TACR3P29371 465 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 CCKBRP32239 447 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms