RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SBK2P0C263 348 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SELPP16109 830 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SEC61A1P61619 476 aaKnown RBP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SORDQ00796 357 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 FOXK2Q01167 660 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 YOD1Q5VVQ6 348 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 GSG1LQ6UXU4 331 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 DNAAF1Q8NEP3 725 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 C19orf43Q9BQ61 176 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 GPN1Q9HCN4 374 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-201ENST00000300527 TAS2R3Q9NYW6 316 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 PIPOXQ9P0Z9 390 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 PCDHGA5Q9Y5G8 931 aa13.59□□□□□ -0.23
COL6A2-201ENST00000300527 SDC3O75056 442 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 LATS1O95835 1130 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 ATP1B1P05026 303 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 GK2Q14410 553 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-201ENST00000300527 C2orf68Q2NKX9 166 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 GXYLT1Q4G148 440 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF805Q5CZA5 627 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
COL6A2-201ENST00000300527 HS6ST2Q96MM7 605 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 C1QTNF2Q9BXJ5 285 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 SLC6A20Q9NP91 592 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 ADAP2Q9NPF8 381 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 KLHL9Q9P2J3 617 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 PCDHGA9Q9Y5G4 932 aaKnown RBP13.58□□□□□ -0.24
COL6A2-201ENST00000300527 ABLIM3O94929 683 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 AIFM1O95831 613 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 UGT2B7P16662 529 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF85Q03923 595 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 LCTLQ6UWM7 567 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 CDK20Q8IZL9 346 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 NUS1Q96E22 293 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 DPYSL5Q9BPU6 564 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 MLXQ9UH92 298 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 PLSCR5A0PG75 271 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 ACSM1Q08AH1 577 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 DECR1Q16698 335 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 NDUFAF6Q330K2 333 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 PUS10Q3MIT2 529 aaKnown RBP13.58□□□□□ -0.24
COL6A2-201ENST00000300527 MRGPREQ86SM8 312 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 AMZ2Q86W34 360 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 PAQR7Q86WK9 346 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 OR52E2Q8NGJ4 325 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 SYNPRQ8TBG9 265 aa13.58□□□□□ -0.24
COL6A2-201ENST00000300527 SETD7Q8WTS6 366 aaKnown RBP13.58□□□□□ -0.24
COL6A2-201ENST00000300527 ARID1AO14497 2285 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 SLC22A31A6NKX4 558 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 PYCARD-AS1I3L0S3 204 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 PLPP2O43688 288 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 ARL6IP5O75915 188 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 PCCBP05166 539 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 NAT2P11245 290 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 LAMP2P13473 410 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 ACHEP22303 614 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 STARP49675 285 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 C4orf46Q504U0 113 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 TPGS2Q68CL5 300 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 FRRS1Q6ZNA5 592 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 DCUN1D3Q8IWE4 304 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 KLHDC8AQ8IYD2 350 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 SLAIN1Q8ND83 568 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 BVESQ8NE79 360 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 SCARB1Q8WTV0 552 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 PPP1R16AQ96I34 528 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF768Q9H5H4 540 aaKnown RBP13.57□□□□□ -0.24
COL6A2-201ENST00000300527 EVA1AQ9H8M9 152 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 BCL2L10Q9HD36 194 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 KRCC1Q9NPI7 259 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-201ENST00000300527 OR10H1Q9Y4A9 318 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 PLXNB3Q9ULL4 1909 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 A0A087WV48 116 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 ZIC2O95409 532 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-201ENST00000300527 RLN2P04090 185 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 NRG3P56975 720 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 RAP2BP61225 183 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF169Q14929 603 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-201ENST00000300527 FIGNL1Q6PIW4 674 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 WDR88Q6ZMY6 472 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 LINC00518Q8N0U6 118 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 BRIX1Q8TDN6 353 aaKnown RBP13.57□□□□□ -0.24
COL6A2-201ENST00000300527 SLC35A4Q96G79 324 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 PGLYRP3Q96LB9 341 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 SLC38A3Q99624 504 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 SCN2AQ99250 2005 aa13.57□□□□□ -0.24
COL6A2-201ENST00000300527 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.56□□□□□ -0.24
COL6A2-201ENST00000300527 PQBP1O60828 265 aaKnown RBP13.56□□□□□ -0.24
COL6A2-201ENST00000300527 RPS15P62841 145 aaKnown RBP13.56□□□□□ -0.24
COL6A2-201ENST00000300527 TMED4Q7Z7H5 227 aa13.56□□□□□ -0.24
COL6A2-201ENST00000300527 ACOT4Q8N9L9 421 aa13.56□□□□□ -0.24
COL6A2-201ENST00000300527 OR56A1Q8NGH5 318 aa13.56□□□□□ -0.24
COL6A2-201ENST00000300527 WNT2BQ93097 391 aa13.56□□□□□ -0.24
COL6A2-201ENST00000300527 AHCYL2Q96HN2 611 aaKnown RBP13.56□□□□□ -0.24
COL6A2-201ENST00000300527 NPAS1Q99742 590 aa13.56□□□□□ -0.24
COL6A2-201ENST00000300527 MFFQ9GZY8 342 aa13.56□□□□□ -0.24
COL6A2-201ENST00000300527 ABRACLQ9P1F3 81 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms