RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PYHIN1Q6K0P9 492 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 LYPD8Q6UX82 237 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 OR7G1Q8NGA0 311 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 METTL2AQ96IZ6 378 aaKnown RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 ADOQ96SZ5 270 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 NRSN2Q9GZP1 204 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 SLA2Q9H6Q3 261 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 PRTFDC1Q9NRG1 225 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ACSS1Q9NUB1 689 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 NDUFB11Q9NX14 153 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 SAGE1Q9NXZ1 904 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 GPR34Q9UPC5 381 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 PDCD5O14737 125 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 OR3A3P47888 321 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 KIAA1024LP59773 190 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 GPLD1P80108 840 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 FOXK2Q01167 660 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 RPE65Q16518 533 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 CCSAPQ6IQ19 270 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 C1orf94Q6P1W5 598 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ZNF793Q6ZN11 406 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 RASD2Q96D21 266 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 RANBP3Q9H6Z4 567 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 RXFP3Q9NSD7 469 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 HPF1Q9NWY4 346 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 HEBP2Q9Y5Z4 205 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 CIB4A0PJX0 185 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 GCM2O75603 506 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 ZNF432O94892 652 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 TRHRP34981 398 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 PRKXP51817 358 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 LRRN1Q6UXK5 716 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 RFPL4BQ6ZWI9 263 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 CLDN22Q8N7P3 220 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 SPERTQ8NA61 448 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 HCAR2Q8TDS4 363 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 SERGEFQ9UGK8 458 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 SLC6A5Q9Y345 797 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 H0YGG7 62 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 DVL2O14641 736 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 CREBL2O60519 120 aaPredicted RBP12.36□□□□□ -0.43
CASC4-201ENST00000299957 TCRBP04435 133 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 GDNFP39905 211 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 ARF3P61204 181 aaPredicted RBP12.36□□□□□ -0.43
CASC4-201ENST00000299957 SNRPGP62308 76 aaKnown RBP12.36□□□□□ -0.43
CASC4-201ENST00000299957 SDR16C5Q8N3Y7 309 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 FAM26EQ8N5C1 309 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 MS4A15Q8N5U1 240 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 SYNPRQ8TBG9 265 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 WDR92Q96MX6 357 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 DDOQ99489 341 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 PSD2Q9BQI7 771 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 SGPP1Q9BX95 441 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 A4GALTQ9NPC4 353 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 FBXO34Q9NWN3 711 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 TBC1D29Q9UFV1 150 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 LAMA2P24043 3122 aaKnown RBP12.36□□□□□ -0.43
CASC4-201ENST00000299957 APC2O95996 2303 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 PRAMEF25A6NGN4 478 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 TMEM150CB9EJG8 249 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 CASC3O15234 703 aaKnown RBP12.36□□□□□ -0.43
CASC4-201ENST00000299957 EIF4EP06730 217 aaKnown RBP12.36□□□□□ -0.43
CASC4-201ENST00000299957 PRKACBP22694 351 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 NPRL2Q8WTW4 380 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 PPP1R14AQ96A00 147 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 SEC22AQ96IW7 307 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 ZBP1Q9H171 429 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 NOX4Q9NPH5 578 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 IFT46Q9NQC8 304 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 FBXL2Q9UKC9 423 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 EXO1Q9UQ84 846 aaKnown RBP12.36□□□□□ -0.43
CASC4-201ENST00000299957 SELENOFO60613 162 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 AQP2P41181 271 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 TAS2R43P59537 309 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 CARD17Q5XLA6 110 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 CD163Q86VB7 1156 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 SIRT6Q8N6T7 355 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 ZNF615Q8N8J6 731 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 LMX1AQ8TE12 382 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 MS4A6EQ96DS6 147 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 DERL3Q96Q80 235 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 ORAI3Q9BRQ5 295 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 TAS2R3Q9NYW6 316 aa12.36□□□□□ -0.43
CASC4-201ENST00000299957 RHPN2P1A8MT19 583 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 GOSR2O14653 212 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 NDUFB2O95178 105 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 LALBAP00709 142 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 SLC6A9P48067 706 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 GALK2Q01415 458 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 IRF3Q14653 427 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 KCNAB1Q14722 419 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 DECR1Q16698 335 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 PRSS53Q2L4Q9 553 aa12.35□□□□□ -0.43
CASC4-201ENST00000299957 CFAP77Q6ZQR2 320 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms