RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 LDOC1O95751 146 aaPredicted RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 GRK6P43250 576 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 ZNF117Q03924 483 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 SPHARQ15513 63 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 FAM69BQ5VUD6 431 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 NXNL2Q5VZ03 156 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 FCRLBQ6BAA4 426 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 PLBD1Q6P4A8 553 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 CXXC5Q7LFL8 322 aaKnown RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 C17orf47Q8NEP4 570 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 THAP3Q8WTV1 239 aaPredicted RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 RFKQ969G6 155 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 PMEPA1Q969W9 287 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 OPALINQ96PE5 141 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 WDR77Q9BQA1 342 aaPredicted RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 OR51E2Q9H255 320 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 KHNYNO15037 678 aaKnown RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 LCN1P31025 176 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 FOXK2Q01167 660 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 TRA2AQ13595 282 aaKnown RBP eCLIP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 PAPD4Q6PIY7 484 aaKnown RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 BPHLQ86WA6 291 aaPredicted RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 PROKR2Q8NFJ6 384 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 C8orf44Q96CB5 159 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 SGTBQ96EQ0 304 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 CRB3Q9BUF7 120 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 TAPBPLQ9BX59 468 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 MED20Q9H944 212 aa20.82■□□□□ 0.92
VSTM4-201ENST00000298454 ZBTB20Q9HC78 741 aaPredicted RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 FGF20Q9NP95 211 aaPredicted RBP20.82■□□□□ 0.92
VSTM4-201ENST00000298454 NCOR1O75376 2440 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 IGKV1D-42A0A075B6H8 117 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 M0R3G1 203 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 MYL12BO14950 172 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 CPNE3O75131 537 aaKnown RBP20.81■□□□□ 0.92
VSTM4-201ENST00000298454 PPP1R3DO95685 299 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 AVPR2P30518 371 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 CLK1P49759 484 aaKnown RBP20.81■□□□□ 0.92
VSTM4-201ENST00000298454 PNLIPRP2P54317 469 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 SSX1Q16384 188 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 SOWAHCQ53LP3 525 aaPredicted RBP20.81■□□□□ 0.92
VSTM4-201ENST00000298454 FAM199XQ6PEV8 388 aaPredicted RBP20.81■□□□□ 0.92
VSTM4-201ENST00000298454 ATG4DQ86TL0 474 aaPredicted RBP20.81■□□□□ 0.92
VSTM4-201ENST00000298454 LAT2Q9GZY6 243 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 RXFP3Q9NSD7 469 aa20.81■□□□□ 0.92
VSTM4-201ENST00000298454 HCRTR2O43614 444 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 SOX3P41225 446 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 MRPL14Q6P1L8 145 aaKnown RBP20.8■□□□□ 0.92
VSTM4-201ENST00000298454 B3GLCTQ6Y288 498 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 OR4F15Q8NGB8 312 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 RHBDD1Q8TEB9 315 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 NACC2Q96BF6 587 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 HCAR1Q9BXC0 346 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 TBL1XR1Q9BZK7 514 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 SLC26A1Q9H2B4 701 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ELOA3DA6NLF2 546 aaPredicted RBP20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ALG1L2C9J202 215 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 NDUFB5O43674 189 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ZNF354AO60765 605 aaPredicted RBP20.8■□□□□ 0.92
VSTM4-201ENST00000298454 HTR1FP30939 366 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ENTPD1P49961 510 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ELOA3BQ3SY89 546 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 C3orf38Q5JPI3 329 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 RTL4Q6ZR62 310 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ATCAYQ86WG3 371 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ELOA3Q8NG57 546 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 ZNF563Q8TA94 476 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 CMC2Q9NRP2 79 aa20.8■□□□□ 0.92
VSTM4-201ENST00000298454 H2AFY2Q9P0M6 372 aaPredicted RBP20.8■□□□□ 0.92
VSTM4-201ENST00000298454 CFAP54Q96N23 3096 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 LOC100506127A0A0U1RQW1 187 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 LNP1A1A4G5 178 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 IRGMA1A4Y4 181 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 CCRL2O00421 344 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 CLPXO76031 633 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 SCG5P05408 212 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 MYL12AP19105 171 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 ACP1P24666 158 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 SLC9A3P48764 834 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 TMEM44Q2T9K0 475 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 ZNF362Q5T0B9 420 aaPredicted RBP20.79■□□□□ 0.92
VSTM4-201ENST00000298454 DBX2Q6ZNG2 339 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 CPEB2Q7Z5Q1 589 aaKnown RBP20.79■□□□□ 0.92
VSTM4-201ENST00000298454 DYNC2LI1Q8TCX1 351 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 DEPDC7Q96QD5 511 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 RNF167Q9H6Y7 350 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 A0A1W2PQD3 144 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 ZC3H12DA2A288 527 aaKnown RBP20.79■□□□□ 0.92
VSTM4-201ENST00000298454 FAM86C2PA6NEL3 165 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 SCO2O43819 266 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 IGFN1Q86VF2 1251 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 TP53INP1Q96A56 240 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 ZHX1-C8orf76Q96EF9 292 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 LPAR4Q99677 370 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 FN3KQ9H479 309 aa20.79■□□□□ 0.92
VSTM4-201ENST00000298454 PPIEQ9UNP9 301 aaKnown RBP20.79■□□□□ 0.92
VSTM4-201ENST00000298454 TRBV11-1A0A0K0K1C0 115 aa20.78■□□□□ 0.92
VSTM4-201ENST00000298454 PNMTP11086 282 aa20.78■□□□□ 0.92
VSTM4-201ENST00000298454 SLC6A6P31641 620 aa20.78■□□□□ 0.92
VSTM4-201ENST00000298454 EVI2BP34910 448 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms